| Variant ID | 7542 |
|---|---|
| Entrez Gene ID | 340107 |
| Gene | LOC340107 (GeneCards) |
| Location | hg19 5:26802930-26802930
hg38 5:26802821-26802821 |
| Disease | Asymptomatic |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000005.9:g.26802930 G>A (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 180915260 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.3813 |
| CADD Raw score (version 1.3) | -0.079478 (Deleterious) |
| FATHMM raw prediction score | 0.07389 (Tolerated) |
| Deleterious probability by DeFine | 0.4879 (Neutral) |
| Entrez Gene ID | 340107 (NCBI Gene) |
|---|---|
| Official Gene Symbol | LOC340107 (GeneCards) |
| Number of variants in LINC02239 in this database | 35 (view all the variants) |
| Full name | long intergenic non-protein coding RNA 2239 |
| Band | 5p14.1 |
| Other IDs | HGNC: HGNC:27969 Ensembl: ENSG00000248908 |
| Other names | None |
| Summary | None |
| Individual ID | 29217584.03 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Asymptomatic |
| OMIM ID |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |