| Variant ID | 7551 |
|---|---|
| Entrez Gene ID | 55789 |
| Gene | DEPDC1B (GeneCards) |
| Location | hg19 5:59913203-59913203
hg38 5:60617376-60617376 |
| Disease | Asymptomatic |
| Method | HiSeq 2000 |
| Mutation(HGVS format) | NC_000005.9:g.59913203 C>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 180915260 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.2669 |
| CADD Raw score (version 1.3) | 0.380536 (Deleterious) |
| FATHMM raw prediction score | 0.0987 (Tolerated) |
| Deleterious probability by DeFine | 0.0823 (Neutral) |
| Entrez Gene ID | 55789 (NCBI Gene) |
|---|---|
| Official Gene Symbol | DEPDC1B (GeneCards) |
| Number of variants in DEPDC1B in this database | 4 (view all the variants) |
| Full name | DEP domain containing 1B |
| Band | 5q12.1 |
| Other IDs | Vega: OTTHUMG00000097083 OMIM: 616073 HGNC: HGNC:24902 Ensembl: ENSG00000035499 |
| Other names | XTP1, BRCC3 |
| Summary | None |
| Individual ID | 29217584.04 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Asymptomatic |
| OMIM ID |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |