| Variant ID | 804 |
|---|---|
| Entrez Gene ID | 8454 |
| Gene | CUL1 (GeneCards) |
| Location | hg19 7:148487504-148487504
hg38 7:148790412-148790412 |
| Disease | Human Skin Fibroblasts (view all the variants in this disease) |
| Method | HiSeq 2500 |
| Mutation(HGVS format) | NC_000007.13:g.148487504 A>G (Genome Assembly: hg19) |
| Exon or Intron | Exon |
|---|---|
| Position in protein | 593 |
| Amino acid changes in protein | N > D |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 159138663 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | 0.5733 |
| CADD Raw score (version 1.3) | 6.413763 (Deleterious) |
| FATHMM raw prediction score | 0.97481 (Tolerated) |
| SIFT score | 0.015 (Deleterious) |
| LRT score | 0 (Deleterious) |
| MutationTaster score | 1 (Deleterious) |
| MutatioinAssessor score | 1.94 (Deleterious) |
| PROVEAN score | -3.85 (Deleterious) |
| MetaSVM score | 0.01 (Deleterious) |
| MetaLR score | 0.491 (Tolerated) |
| MCAP score | 0.077 (Deleterious) |
| FitCons score | 0.719 (Highly Significant p < 0.003 ) |
| Genomic Evolutionary Rate Profiling (GERP) score | 5.07 |
| PhyloP score based on multiple alignment of 100 vertebrates | 8.913 |
| PhastCons score based on multiple alignment of 100 vertebrates | 1 |
| SiPhy log transformed odds ratio on multiple alignment of 29 mammals | 14.848 |
| Deleterious probability by iFish2 | 0.6983 (Deleterious) |
| Deleterious probability by DeFine | 0.9087 (Deleterious) |
| Entrez Gene ID | 8454 (NCBI Gene) |
|---|---|
| Official Gene Symbol | CUL1 (GeneCards) |
| Number of variants in CUL1 in this database | 1 (view all the variants) |
| Full name | cullin 1 |
| Band | 7q36.1 |
| Other IDs | Vega: OTTHUMG00000152776 OMIM: 603134 HGNC: HGNC:2551 Ensembl: ENSG00000055130 |
| Other names | None |
| Summary | None |
| Individual ID | 27788131.01 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 27788131 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Human Skin Fibroblasts (view all the variants in this disease) |
| OMIM ID | 120353 |
| Pubmed ID | 27788131 |
|---|---|
| Title | The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts. |
| Journal | PLoS Genetics |
| Publication date | 2016.10 |
| Disease | Human Skin Fibroblasts |
| Population | Caucasian |
| Number of cases | Male cases: 2; |