Overview

Variant ID 875
Entrez Gene ID 23504
Gene RIMBP2 (GeneCards)
Location hg19 12:130897174-130897174
hg38 12:130412629-130412629
Disease Human Skin Fibroblasts (view all the variants in this disease)
Method HiSeq 2500
Mutation(HGVS format) NC_000012.11:g.130897174 C>T (Genome Assembly: hg19)

Other information

Exon or Intron Exon
Position in protein 937
Amino acid changes in protein V > V
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 133851895

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score 1.4634
CADD Raw score (version 1.3) 1.47052 (Deleterious)
FATHMM raw prediction score 0.97627 (Tolerated)
Deleterious probability by DeFine 0.8635 (Deleterious)
Entrez Gene ID 23504 (NCBI Gene)
Official Gene Symbol RIMBP2 (GeneCards)
Number of variants in RIMBP2 in this database 10 (view all the variants)
Full name RIMS binding protein 2
Band 12q24.33
Other IDs Vega: OTTHUMG00000168385
OMIM: 611602
HGNC: HGNC:30339
Ensembl: ENSG00000060709
Other names RBP2, RIM-BP2, PPP1R133
Summary None

Individual #1

Individual ID 27788131.01 (view all the variants in this individual)
Pubmed ID 27788131
Whose mosaic mutation Normal  
Phenotype 1  
Disease Human Skin Fibroblasts (view all the variants in this disease)
OMIM ID 120353

Publication #1: 27788131

Pubmed ID 27788131
Title The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts.
Journal PLoS Genetics
Publication date 2016.10
Disease Human Skin Fibroblasts
Population Caucasian
Number of cases Male cases: 2;