Variant ID | 9003 |
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Entrez Gene ID | 10767 |
Gene | HBS1L (GeneCards) |
Location | hg19 6:135447974-135447974
hg38 6:135126836-135126836 |
Disease | Asymptomatic |
Method | HiSeq X Ten |
Mutation(HGVS format) | NC_000006.11:g.135447974 C>G (Genome Assembly: GRCh37) |
Exon or Intron | NA |
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Position in protein | NA |
Amino acid changes in protein | NA > NA |
Position in cDNA | NA |
Changes in cDNA | NA > NA |
mRNA accession | NA |
mRNA length | NA |
Reference length | 171115067 |
MAF in gnomAD genome (version 2.0.1) | 0 |
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EIGEN score | 0.1679 |
CADD Raw score (version 1.3) | 1.523364 (Deleterious) |
FATHMM raw prediction score | 0.59649 (Tolerated) |
Deleterious probability by DeFine | 0.0786 (Neutral) |
Entrez Gene ID | 10767 (NCBI Gene) |
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Official Gene Symbol | HBS1L (GeneCards) |
Number of variants in HBS1L in this database | 6 (view all the variants) |
Full name | HBS1 like translational GTPase |
Band | 6q23.3 |
Other IDs | Vega: OTTHUMG00000015626 OMIM: 612450 HGNC: HGNC:4834 Ensembl: ENSG00000112339 |
Other names | ERFS, HBS1, EF-1a, eRF3c, HSPC276 |
Summary | This gene encodes a member of the GTP-binding elongation factor family. It is expressed in multiple tissues with the highest expression in heart and skeletal muscle. The intergenic region of this gene and the MYB gene has been identified to be a quantitative trait locus (QTL) controlling fetal hemoglobin level, and this region influnces erythrocyte, platelet, and monocyte counts as well as erythrocyte volume and hemoglobin content. DNA polymorphisms at this region associate with fetal hemoglobin levels and pain crises in sickle cell disease. A single nucleotide polymorphism in exon 1 of this gene is significantly associated with severity in beta-thalassemia/Hemoglobin E. Multiple alternatively spliced transcript variants encoding different protein isoforms have been found for this gene. [provided by RefSeq, May 2009] |
Individual ID | 29217584.03 (view all the variants in this individual) |
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Pubmed ID | 29217584 |
Whose mosaic mutation | Normal |
Phenotype | 1 |
Disease | Asymptomatic |
OMIM ID |
Pubmed ID | 29217584 |
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Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
Journal | Science |
Publication date | 2018.02 |
Disease | Cockayne syndrome Xeroderma Pigmentosum |
Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |