Overview

Variant ID 9003
Entrez Gene ID 10767
Gene HBS1L (GeneCards)
Location hg19 6:135447974-135447974
hg38 6:135126836-135126836
Disease Asymptomatic
Method HiSeq X Ten
Mutation(HGVS format) NC_000006.11:g.135447974 C>G (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 171115067

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score 0.1679
CADD Raw score (version 1.3) 1.523364 (Deleterious)
FATHMM raw prediction score 0.59649 (Tolerated)
Deleterious probability by DeFine 0.0786 (Neutral)
Entrez Gene ID 10767 (NCBI Gene)
Official Gene Symbol HBS1L (GeneCards)
Number of variants in HBS1L in this database 6 (view all the variants)
Full name HBS1 like translational GTPase
Band 6q23.3
Other IDs Vega: OTTHUMG00000015626
OMIM: 612450
HGNC: HGNC:4834
Ensembl: ENSG00000112339
Other names ERFS, HBS1, EF-1a, eRF3c, HSPC276
Summary This gene encodes a member of the GTP-binding elongation factor family. It is expressed in multiple tissues with the highest expression in heart and skeletal muscle. The intergenic region of this gene and the MYB gene has been identified to be a quantitative trait locus (QTL) controlling fetal hemoglobin level, and this region influnces erythrocyte, platelet, and monocyte counts as well as erythrocyte volume and hemoglobin content. DNA polymorphisms at this region associate with fetal hemoglobin levels and pain crises in sickle cell disease. A single nucleotide polymorphism in exon 1 of this gene is significantly associated with severity in beta-thalassemia/Hemoglobin E. Multiple alternatively spliced transcript variants encoding different protein isoforms have been found for this gene. [provided by RefSeq, May 2009]

Individual #1

Individual ID 29217584.03 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;