| Variant ID | 979 |
|---|---|
| Entrez Gene ID | 165215 |
| Gene | FAM171B (GeneCards) |
| Location | hg19 2:187627081-187627081
hg38 2:186762354-186762354 |
| Disease | Human Skin Fibroblasts (view all the variants in this disease) |
| Method | HiSeq 2500 |
| Mutation(HGVS format) | NC_000002.11:g.187627081 G>A (Genome Assembly: hg19) |
| Exon or Intron | Exon |
|---|---|
| Position in protein | 671 |
| Amino acid changes in protein | R > K |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 243199373 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | 0.9175 |
| CADD Raw score (version 1.3) | 6.134639 (Deleterious) |
| FATHMM raw prediction score | 0.99209 (Tolerated) |
| SIFT score | 0 (Deleterious) |
| LRT score | 0 (Deleterious) |
| MutationTaster score | 1 (Deleterious) |
| MutatioinAssessor score | 2.46 (Deleterious) |
| PROVEAN score | -2.06 (Tolerated) |
| MetaSVM score | -0.739 (Tolerated) |
| MetaLR score | 0.23 (Tolerated) |
| MCAP score | 0.043 (Deleterious) |
| FitCons score | 0.706 (Highly Significant p < 0.003 ) |
| Genomic Evolutionary Rate Profiling (GERP) score | 6.02 |
| PhyloP score based on multiple alignment of 100 vertebrates | 9.566 |
| PhastCons score based on multiple alignment of 100 vertebrates | 1 |
| SiPhy log transformed odds ratio on multiple alignment of 29 mammals | 20.547 |
| Deleterious probability by iFish2 | 0.8996 (Deleterious) |
| Deleterious probability by DeFine | 0.9587 (Deleterious) |
| Entrez Gene ID | 165215 (NCBI Gene) |
|---|---|
| Official Gene Symbol | FAM171B (GeneCards) |
| Number of variants in FAM171B in this database | 1 (view all the variants) |
| Full name | family with sequence similarity 171 member B |
| Band | 2q32.1 |
| Other IDs | Vega: OTTHUMG00000154278 HGNC: HGNC:29412 Ensembl: ENSG00000144369 |
| Other names | KIAA1946 |
| Summary | None |
| Individual ID | 27788131.02 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 27788131 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Human Skin Fibroblasts (view all the variants in this disease) |
| OMIM ID | 120353 |
| Pubmed ID | 27788131 |
|---|---|
| Title | The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts. |
| Journal | PLoS Genetics |
| Publication date | 2016.10 |
| Disease | Human Skin Fibroblasts |
| Population | Caucasian |
| Number of cases | Male cases: 2; |