AutismKB 2.0

Annotation Details for DDX39


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Basic Information Top
Gene Symbol:DDX39 ( BAT1,BAT1L,DDXL,MGC18203,MGC8417,URH49 )
Gene Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
Band: 19p13.12
Quick LinksEntrez ID:10212; OMIM: NA; Uniprot ID:DDX39_HUMAN; ENSEMBL ID: ENSG00000123136; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005634IDA-nucleus21859714
GO:0005654TAS-nucleoplasm-
GO:0005681IBA-spliceosomal complex-
GO:0005737IDAcolocalizes_withcytoplasm21859714
GO:0016020IDA-membrane19946888
GO:0016607IDA-nuclear speck-
GO ID Evidence Qualifier GO_term References
GO:0003723IDA-RNA binding22658674
GO:0004004IBA-ATP-dependent RNA helicase activity-
GO:0005515IPI-protein binding14667819
GO:0005524IEA-ATP binding-
GO:0016887EXP-ATPase activity20844015
GO:0042802IPI-identical protein binding25416956
GO ID Evidence Qualifier GO_term References
GO:0000398IGI-mRNA splicing, via spliceosome15047853
GO:0006369TAS-termination of RNA polymerase II transcription-
GO:0006405TAS-RNA export from nucleus-
GO:0006406IGI-mRNA export from nucleus15047853
GO:0006974IBA-cellular response to DNA damage stimulus-
GO:0010468IBA-regulation of gene expression-
GO:0010501IBA-RNA secondary structure unwinding-
GO:0031124TAS-mRNA 3'-end processing-
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
DDX39GBAS11550720562859 Affinity Capture-MS
DDX39GBAS10890120562859 Affinity Capture-MS
DDX39CCL1411226115338056 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
DDX39CCL1411550715338056 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
DDX39UBC11316417196963 Affinity Capture-Western
DDX39UBC11550717196963 Affinity Capture-Western
DDX39THOC411548615047853 17196963 Affinity Capture-Western; Reconstituted Complex
DDX39THOC411550715047853 17196963 Affinity Capture-Western; Reconstituted Complex
SARNPDDX3912404916189514 17196963 Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex; Two-hybrid
SARNPDDX3911550716189514 17196963 Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex; Two-hybrid
C19orf62DDX3911885519615732 Affinity Capture-MS
C19orf62DDX3911550719615732 Affinity Capture-MS
UBA5DDX3912296420562859 Affinity Capture-MS
UBA5DDX3911550720562859 Affinity Capture-MS
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:1915528
  • Data Attributes: MGI curated and HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-030131-4275'