AutismKB 2.0

Annotation Details for SYNCRIP


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Basic Information Top
Gene Symbol:SYNCRIP ( FLJ31626,GRY-RBP,GRYRBP,HNRPQ1,NSAP1,PP68,dJ3J17.2,hnRNP-Q )
Gene Full Name: synaptotagmin binding, cytoplasmic RNA interacting protein
Band: 6q14.3
Quick LinksEntrez ID:10492; OMIM: NA; Uniprot ID:HNRPQ_HUMAN; ENSEMBL ID: ENSG00000135316; HGNC ID: 16918
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005634TAS-nucleus9847309
GO:0005654IEA-nucleoplasm-
GO:0005783IEA-endoplasmic reticulum-
GO:0016020IDA-membrane16210410
GO:0030529IDA-intracellular ribonucleoprotein complex15479637
GO:0070937IDA-CRD-mediated mRNA stability complex19029303
GO:0071013IDA-catalytic step 2 spliceosome11991638
GO:0071204ISS-histone pre-mRNA 3'end processing complex-
GO:0097452IDA-GAIT complex15479637
GO ID Evidence Qualifier GO_term References
GO:0003723IDA-RNA binding22658674
GO:0005515IPI-protein binding12674497
GO:0008143IEA-poly(A) binding-
GO ID Evidence Qualifier GO_term References
GO:0000398IC-mRNA splicing, via spliceosome11991638
GO:0001649IDA-osteoblast differentiation16210410
GO:0006396TAS-RNA processing9847309
GO:0008380TAS-RNA splicing9847309
GO:0016032IEA-viral process-
GO:0017148IDA-negative regulation of translation23071094
GO:0017148IMP-negative regulation of translation15479637
GO:0070934IMP-CRD-mediated mRNA stabilization19029303
GO:0071346IDA-cellular response to interferon-gamma15479637
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
SYNCRIPAPOBEC111575511352648 Reconstituted Complex; Two-hybrid
SYNCRIPAPOBEC110683611352648 Reconstituted Complex; Two-hybrid
SYNCRIPCDK911575517643375 Affinity Capture-MS
SYNCRIPCDK910745917643375 Affinity Capture-MS
SYNCRIPGRB21091429341187 Reconstituted Complex
SYNCRIPGRB21157559341187 Reconstituted Complex
SYNCRIPHNRNPA111575517643375 Affinity Capture-MS
SYNCRIPHNRNPA110942017643375 Affinity Capture-MS
SYNCRIPHNRNPH111575517643375 Affinity Capture-MS
SYNCRIPHNRNPH110942817643375 Affinity Capture-MS
SYNCRIPPRMT111575512183049 Biochemical Activity
SYNCRIPPRMT110951212183049 Biochemical Activity
SYNCRIPINSR11575511994298 Biochemical Activity
SYNCRIPINSR10985411994298 Biochemical Activity
SYNCRIPPLCG11157559341187 Reconstituted Complex
SYNCRIPPLCG11113519341187 Reconstituted Complex
SYNCRIPPTPN111157559847309 Two-hybrid
SYNCRIPPTPN111117459847309 Two-hybrid
SYNCRIPSYT111575510734137 Reconstituted Complex
SYNCRIPSYT111272310734137 Reconstituted Complex
SYNCRIPSYT411575510734137 Reconstituted Complex
SYNCRIPSYT411272410734137 Reconstituted Complex
SYNCRIPCNBP11575517353931 Affinity Capture-MS
SYNCRIPCNBP11338717353931 Affinity Capture-MS
SYNCRIPSTK2411575517353931 Affinity Capture-MS
SYNCRIPSTK2411401117353931 Affinity Capture-MS
SYNCRIPPRKRA11575517353931 Affinity Capture-MS
SYNCRIPPRKRA11414317353931 Affinity Capture-MS
SYNCRIPSYT711575510734137 Affinity Capture-Western; Reconstituted Complex
SYNCRIPSYT711452510734137 Affinity Capture-Western; Reconstituted Complex
SYT9SYNCRIP12680210734137 Affinity Capture-Western; Reconstituted Complex
SYT9SYNCRIP11575510734137 Affinity Capture-Western; Reconstituted Complex
SYT8SYNCRIP11575510734137 Affinity Capture-Western; Reconstituted Complex
SYT8SYNCRIP12465410734137 Affinity Capture-Western; Reconstituted Complex
SYT2SYNCRIP12608510734137 Reconstituted Complex
SYT2SYNCRIP11575510734137 Reconstituted Complex
SYT3SYNCRIP11575510734137 Reconstituted Complex
SYT3SYNCRIP12398510734137 Reconstituted Complex
A1CFSYNCRIP11575511134005 11352648 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
A1CFSYNCRIP11900411134005 11352648 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
PUF60SYNCRIP11650217353931 Affinity Capture-MS
PUF60SYNCRIP11575517353931 Affinity Capture-MS
KHDRBS2SYNCRIP11575517643375 Affinity Capture-MS
KHDRBS2SYNCRIP12843617643375 Affinity Capture-MS
MEPCESYNCRIP11575517643375 Affinity Capture-MS
MEPCESYNCRIP12112217643375 Affinity Capture-MS
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:1891690
  • Data Attributes: MGI curated and HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-030131-4862'