AutismKB 2.0

Annotation Details for COL4A1


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Basic Information Top
Gene Symbol:COL4A1 ( arresten )
Gene Full Name: collagen, type IV, alpha 1
Band: 13q34
Quick LinksEntrez ID:1282; OMIM: 120130; Uniprot ID:CO4A1_HUMAN; ENSEMBL ID: ENSG00000187498; HGNC ID: 2202
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005576NAS-extracellular region14718574
GO:0005576TAS-extracellular region-
GO:0005587IMP-collagen type IV trimer16107487
GO:0005604IC-basement membrane23065703
GO:0005615IEA-extracellular space-
GO:0005788TAS-endoplasmic reticulum lumen-
GO:0031012IDA-extracellular matrix23658023
GO:0031012ISScolocalizes_withextracellular matrix22261194
GO ID Evidence Qualifier GO_term References
GO:0005201IMP-extracellular matrix structural constituent16107487
GO:0005515IPI-protein binding12011424
GO:0030023IC-extracellular matrix constituent conferring elasticity16107487
GO:0048407IDA-platelet-derived growth factor binding8900172
GO ID Evidence Qualifier GO_term References
GO:0001569IMP-branching involved in blood vessel morphogenesis20818663
GO:0007420IMP-brain development16107487
GO:0007528IEA-neuromuscular junction development-
GO:0030198TAS-extracellular matrix organization-
GO:0030574TAS-collagen catabolic process-
GO:0030855IEA-epithelial cell differentiation-
GO:0038063IEA-collagen-activated tyrosine kinase receptor signaling pathway-
GO:0048514IMP-blood vessel morphogenesis20818663
GO:0061304IMP-retinal blood vessel morphogenesis20818663
GO:0061333IMP-renal tubule morphogenesis18160688
GO:0071230IEA-cellular response to amino acid stimulus-
GO:0071711IMP-basement membrane organization18160688
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
MAGCOL4A11076792446864 Reconstituted Complex
MAGCOL4A11102732446864 Reconstituted Complex
THBS1COL4A11076793571333 Reconstituted Complex
THBS1COL4A11129153571333 Reconstituted Complex
COL7A1COL4A11076799169408 Reconstituted Complex
COL7A1COL4A11076919169408 Reconstituted Complex
NID2COL4A11076799733643 Reconstituted Complex
NID2COL4A11164769733643 Reconstituted Complex
NID1COL4A11076799733643 Reconstituted Complex
NID1COL4A11108769733643 Reconstituted Complex
COL4A1COL4A110767912011424 Co-crystal Structure
COL4A2COL4A110768112011424 Co-crystal Structure
COL4A2COL4A110767912011424 Co-crystal Structure
DISC1COL4A110767912812986 Two-hybrid
DISC1COL4A111806112812986 Two-hybrid
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:88454
  • Data Attributes: MGI curated and HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-081105-114'