AutismKB 2.0

Annotation Details for SNW1


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Basic Information Top
Gene Symbol:SNW1 ( Bx42,MGC119379,NCOA-62,PRPF45,Prp45,SKIIP,SKIP )
Gene Full Name: SNW domain containing 1
Band: 14q24.3
Quick LinksEntrez ID:22938; OMIM: 603055; Uniprot ID:SNW1_HUMAN; ENSEMBL ID: ENSG00000100603; HGNC ID: 16696
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005634IDA-nucleus9569025
GO:0005654IDA-nucleoplasm-
GO:0005654TAS-nucleoplasm-
GO:0005681IDA-spliceosomal complex15194481
GO:0008024IDAcolocalizes_withcyclin/CDK positive transcription elongation factor complex15905409
GO:0016363IDA-nuclear matrix12840015
GO:0016604IDA-nuclear body-
GO:0016607IDA-nuclear speck23566155
GO:0071013IDA-catalytic step 2 spliceosome11991638
GO:0071014IBA-post-mRNA release spliceosomal complex-
GO:0071146IDAcolocalizes_withSMAD3-SMAD4 protein complex11278756
GO ID Evidence Qualifier GO_term References
GO:0003713IDA-transcription coactivator activity11514567
GO:0003714IDA-transcription corepressor activity14985122
GO:0003723IDA-RNA binding22681889
GO:0005112IPI-Notch binding10713164
GO:0005515IPI-protein binding9569025
GO:0019899IPI-enzyme binding20007319
GO:0035257IDA-nuclear hormone receptor binding19934264
GO:0042809IDA-vitamin D receptor binding12529369
GO:0042974IDA-retinoic acid receptor binding11514567
GO:0046332IDA-SMAD binding11278756
GO:0050681IPI-androgen receptor binding23566155
GO ID Evidence Qualifier GO_term References
GO:0000122IDA-negative regulation of transcription from RNA polymerase II promoter14985122
GO:0000350IBA-generation of catalytic spliceosome for second transesterification step-
GO:0000398IC-mRNA splicing, via spliceosome11991638
GO:0000398IDA-mRNA splicing, via spliceosome15194481
GO:0000398TAS-mRNA splicing, via spliceosome-
GO:0006357TAS-regulation of transcription from RNA polymerase II promoter9632709
GO:0006367TAS-transcription initiation from RNA polymerase II promoter-
GO:0007219TAS-Notch signaling pathway-
GO:0016032IEA-viral process-
GO:0030511IDA-positive regulation of transforming growth factor beta receptor signaling pathway11278756
GO:0042771IMP-intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator21460037
GO:0043923IDA-positive regulation by host of viral transcription15905409
GO:0043923IMP-positive regulation by host of viral transcription19818711
GO:0045892IDA-negative regulation of transcription, DNA-templated10713164
GO:0045944IDA-positive regulation of transcription from RNA polymerase II promoter14985122
GO:0045944TAS-positive regulation of transcription from RNA polymerase II promoter-
GO:0048026IMP-positive regulation of mRNA splicing, via spliceosome12840015
GO:0048384IDA-retinoic acid receptor signaling pathway19934264
GO:0048385IDA-regulation of retinoic acid receptor signaling pathway14985122
GO:0050769ISS-positive regulation of neurogenesis-
GO:0051571IMP-positive regulation of histone H3-K4 methylation19818711
GO:0070562IDA-regulation of vitamin D receptor signaling pathway14985122
GO:0070564IDA-positive regulation of vitamin D receptor signaling pathway9632709
GO:0071300IDA-cellular response to retinoic acid19934264
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
SNW1CCNT111659719818711 Affinity Capture-Western
SNW1CCNT110734319818711 Affinity Capture-Western
SNW1CDK911659719818711 Affinity Capture-Western
SNW1CDK910745919818711 Affinity Capture-Western
SNW1EP30010834714985122 Reconstituted Complex
SNW1EP30011659714985122 Reconstituted Complex
SNW1HDAC211659710644367 Two-hybrid
SNW1HDAC210931610644367 Two-hybrid
SNW1RBPJ10973610644367 10713164 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
SNW1RBPJ11659710644367 10713164 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
SNW1SMAD211659711278756 Phenotypic Enhancement; Reconstituted Complex; Two-hybrid
SNW1SMAD211026211278756 Phenotypic Enhancement; Reconstituted Complex; Two-hybrid
SNW1SMAD311659711278756 Phenotypic Enhancement; Reconstituted Complex; Two-hybrid
SNW1SMAD311026311278756 Phenotypic Enhancement; Reconstituted Complex; Two-hybrid
SNW1SMAD411026411278756 Phenotypic Enhancement; Two-hybrid
SNW1SMAD411659711278756 Phenotypic Enhancement; Two-hybrid
SNW1MEN111659719818711 Affinity Capture-Western; Reconstituted Complex
SNW1MEN111038419818711 Affinity Capture-Western; Reconstituted Complex
SNW1MLL11044319818711 Affinity Capture-Western
SNW1MLL11659719818711 Affinity Capture-Western
SNW1MYC11069419818711 Affinity Capture-Western
SNW1MYC11659719818711 Affinity Capture-Western
SNW1MYOD111659711371506 Affinity Capture-Western
SNW1MYOD111073711371506 Affinity Capture-Western
SNW1NOTCH111091310713164 11404076 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
SNW1NOTCH111659710713164 11404076 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
SNW1NOTCH311091611404076 Reconstituted Complex
SNW1NOTCH311659711404076 Reconstituted Complex
SNW1RB111659712466551 Reconstituted Complex
SNW1RB111186012466551 Reconstituted Complex
SNW1RBL111186812466551 Reconstituted Complex
SNW1RBL111659712466551 Reconstituted Complex
SNW1RBL211186912466551 Reconstituted Complex
SNW1RBL211659712466551 Reconstituted Complex
SNW1RXRA11659711514567 Reconstituted Complex
SNW1RXRA11216811514567 Reconstituted Complex
SNW1SKI1123889569025 11278756 11522815 Affinity Capture-Western; Phenotypic Suppression; Reconstituted Complex; Two-hybrid
SNW1SKI1165979569025 11278756 11522815 Affinity Capture-Western; Phenotypic Suppression; Reconstituted Complex; Two-hybrid
SNW1SKIL11238911278756 Phenotypic Suppression
SNW1SKIL11659711278756 Phenotypic Suppression
SNW1SRC11259214985122 Reconstituted Complex
SNW1SRC11659714985122 Reconstituted Complex
SNW1TCEA211278117643375 Affinity Capture-MS
SNW1TCEA211659717643375 Affinity Capture-MS
SNW1VDR1132649632709 11514567 Far Western; Reconstituted Complex; Two-hybrid
SNW1VDR1165979632709 11514567 Far Western; Reconstituted Complex; Two-hybrid
SNW1PABPN111377711371506 Affinity Capture-Western; Phenotypic Enhancement; Reconstituted Complex; Two-hybrid
SNW1PABPN111659711371506 Affinity Capture-Western; Phenotypic Enhancement; Reconstituted Complex; Two-hybrid
SNW1IKBKG11659720211142 Two-hybrid
SNW1IKBKG11408920211142 Two-hybrid
SNW1NCOA111420011514567 Phenotypic Enhancement; Phenotypic Suppression
SNW1NCOA111659711514567 Phenotypic Enhancement; Phenotypic Suppression
SNW1CIR111491610644367 Affinity Capture-Western; Two-hybrid
SNW1CIR111659710644367 Affinity Capture-Western; Two-hybrid
SNW1NCOR111497314985122 Reconstituted Complex; Two-hybrid
SNW1NCOR111659714985122 Reconstituted Complex; Two-hybrid
SNW1NCOR211659710644367 10713164 14985122 Affinity Capture-Western; Two-hybrid
SNW1NCOR211497410644367 10713164 14985122 Affinity Capture-Western; Two-hybrid
SNW1SRRM111554416159877 Affinity Capture-MS
SNW1SRRM111659716159877 Affinity Capture-MS
SNW1NCOA211659711514567 Phenotypic Enhancement
SNW1NCOA211576111514567 Phenotypic Enhancement
SND1SNW111659710644367 Affinity Capture-Western
SND1SNW111797410644367 Affinity Capture-Western
SIN3ASNW111659710644367 Reconstituted Complex
SIN3ASNW111743910644367 Reconstituted Complex
ASCC2SNW111659716169070 Two-hybrid
ASCC2SNW112392116169070 Two-hybrid
ZSCAN1SNW111659720211142 Two-hybrid
ZSCAN1SNW112982520211142 Two-hybrid
PCBD2SNW111659720211142 Two-hybrid
PCBD2SNW112389320211142 Two-hybrid
TRIM15SNW111659720211142 Two-hybrid
TRIM15SNW112462620211142 Two-hybrid
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-030131-571'