AutismKB 2.0

Annotation Details for SF3B1


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Basic Information Top
Gene Symbol:SF3B1 ( Hsh155,PRP10,PRPF10,SAP155,SF3b155 )
Gene Full Name: splicing factor 3b, subunit 1, 155kDa
Band: 2q33.1
Quick LinksEntrez ID:23451; OMIM: 605590; Uniprot ID:SF3B1_HUMAN; ENSEMBL ID: ENSG00000115524; HGNC ID: 10768
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005634IDA-nucleus18559850
GO:0005654TAS-nucleoplasm-
GO:0005681NAS-spliceosomal complex9585501
GO:0005686IDA-U2 snRNP11252167
GO:0005689IDA-U12-type spliceosomal complex15146077
GO:0016607IDA-nuclear speck-
GO:0034693IDA-U11/U12 snRNP11252167
GO:0071004IBA-U2-type prespliceosome-
GO:0071013IDA-catalytic step 2 spliceosome11991638
GO ID Evidence Qualifier GO_term References
GO:0003723IDA-RNA binding22658674
GO:0003729IBA-mRNA binding-
GO:0005515IPI-protein binding19515850
GO ID Evidence Qualifier GO_term References
GO:0000245IBA-spliceosomal complex assembly-
GO:0000375NAS-RNA splicing, via transesterification reactions9585501
GO:0000398IC-mRNA splicing, via spliceosome11991638
GO:0000398IDA-mRNA splicing, via spliceosome11252167
GO:0000398NAS-mRNA splicing, via spliceosome9585501
GO:0000398TAS-mRNA splicing, via spliceosome-
GO:0045815TAS-positive regulation of gene expression, epigenetic-
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
SF3B1APBB111701716055720 Affinity Capture-MS
SF3B1APBB110681916055720 Affinity Capture-MS
SF3B1CCNE11073389891079 Affinity Capture-Western
SF3B1CCNE11170179891079 Affinity Capture-Western
SF3B1CDC5L10742411101529 Affinity Capture-MS; Co-purification
SF3B1CDC5L11701711101529 Affinity Capture-MS; Co-purification
SF3B1GSK3B10918717353931 Affinity Capture-MS
SF3B1GSK3B11701717353931 Affinity Capture-MS
SF3B1H3F3A10927217403666 Affinity Capture-MS
SF3B1H3F3A11701717403666 Affinity Capture-MS
SF3B1MYC11069420936779 Two-hybrid
SF3B1MYC11701720936779 Two-hybrid
SF3B1PPP1R811150312105215 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
SF3B1PPP1R811701712105215 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
SF3B1YWHAZ11336617353931 Affinity Capture-MS
SF3B1YWHAZ11701717353931 Affinity Capture-MS
SF3B1SF3A211382612234937 Affinity Capture-MS
SF3B1SF3A211701712234937 Affinity Capture-MS
SF3B1HDAC311436817353931 Affinity Capture-MS
SF3B1HDAC311701717353931 Affinity Capture-MS
SF3B1BAZ1B11449716603771 Affinity Capture-MS; Affinity Capture-Western
SF3B1BAZ1B11701716603771 Affinity Capture-MS; Affinity Capture-Western
SF3B1ATG1211458717353931 Affinity Capture-MS
SF3B1ATG1211701717353931 Affinity Capture-MS
SF3B1SNRNP4011480517353931 Affinity Capture-MS
SF3B1SNRNP4011701717353931 Affinity Capture-MS
SF3B1TOPORS11550517803295 Affinity Capture-MS
SF3B1TOPORS11701717803295 Affinity Capture-MS
SF3B1SF3B411701712234937 Affinity Capture-MS
SF3B1SF3B411555412234937 Affinity Capture-MS
SF3B1SMNDC111557417353931 Affinity Capture-MS
SF3B1SMNDC111701717353931 Affinity Capture-MS
SF3B1TCERG111612015456888 16055720 Affinity Capture-MS
SF3B1TCERG111701715456888 16055720 Affinity Capture-MS
SF3B1RNPS111612517353931 Affinity Capture-MS
SF3B1RNPS111701717353931 Affinity Capture-MS
SF3B1SF3B211701710490618 12234937 Affinity Capture-MS; Affinity Capture-Western
SF3B1SF3B211618810490618 12234937 Affinity Capture-MS; Affinity Capture-Western
SF3B1WBP411636316055720 Affinity Capture-MS
SF3B1WBP411701716055720 Affinity Capture-MS
SF3B1DDX4211645412234937 Affinity Capture-MS; Affinity Capture-Western
SF3B1DDX4211701712234937 Affinity Capture-MS; Affinity Capture-Western
SF3B1PUF6011650217353931 Affinity Capture-MS
SF3B1PUF6011701717353931 Affinity Capture-MS
SF3B1SF3B311701610490618 12234937 Affinity Capture-MS; Affinity Capture-Western
SF3B1SF3B311701710490618 12234937 Affinity Capture-MS; Affinity Capture-Western
SF3B14SF3B111701711500380 12234937 Affinity Capture-MS; Reconstituted Complex
SF3B14SF3B111965111500380 12234937 Affinity Capture-MS; Reconstituted Complex
SF3B5SF3B111701712234937 Affinity Capture-MS
SF3B5SF3B112364512234937 Affinity Capture-MS
PHF5ASF3B112429612234937 Affinity Capture-MS
PHF5ASF3B111701712234937 Affinity Capture-MS
RNU12-2PSF3B111787215146077 Affinity Capture-MS
RNU12-2PSF3B111701715146077 Affinity Capture-MS
RNU11SF3B111787315146077 Affinity Capture-MS
RNU11SF3B111701715146077 Affinity Capture-MS
WWOXSF3B111970716055720 Affinity Capture-MS
WWOXSF3B111701716055720 Affinity Capture-MS
PRPF40ASF3B112079216055720 Affinity Capture-MS
PRPF40ASF3B111701716055720 Affinity Capture-MS
BRF2SF3B112057817353931 Affinity Capture-MS
BRF2SF3B111701717353931 Affinity Capture-MS
SAP130SF3B112273518173839 Affinity Capture-Western
SAP130SF3B111701718173839 Affinity Capture-Western
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:1932339
  • Data Attributes: MGI curated and HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-040827-3'