AutismKB 2.0

Annotation Details for PRPF6


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Basic Information Top
Gene Symbol:PRPF6 ( ANT-1,C20orf14,Prp6,TOM,U5-102K,hPrp6 )
Gene Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Band: 20q13.33
Quick LinksEntrez ID:24148; OMIM: NA; Uniprot ID:PRP6_HUMAN; ENSEMBL ID: ENSG00000101161; HGNC ID: 15860
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005634IDA-nucleus16414017
GO:0005654TAS-nucleoplasm-
GO:0005681NAS-spliceosomal complex10788320
GO:0005682IDA-U5 snRNP10788320
GO:0016020IDA-membrane19946888
GO:0016607IDA-nuclear speck-
GO:0046540IDA-U4/U6 x U5 tri-snRNP complex10788320
GO:0071013IDA-catalytic step 2 spliceosome11991638
GO ID Evidence Qualifier GO_term References
GO:0003713IGI-transcription coactivator activity16414017
GO:0003723IDA-RNA binding20797886
GO:0005515IPI-protein binding12620389
GO:0043021IDA-ribonucleoprotein complex binding10788320
GO:0050681IPI-androgen receptor binding16414017
GO ID Evidence Qualifier GO_term References
GO:0000244IC-spliceosomal tri-snRNP complex assembly10788320
GO:0000244IMP-spliceosomal tri-snRNP complex assembly15257298
GO:0000245NAS-spliceosomal complex assembly10788320
GO:0000375NAS-RNA splicing, via transesterification reactions10788320
GO:0000398IC-mRNA splicing, via spliceosome10788320
GO:0000398TAS-mRNA splicing, via spliceosome-
GO:0006403IMP-RNA localization20797886
GO:0008380NAS-RNA splicing10788320
GO:0045944IDA-positive regulation of transcription from RNA polymerase II promoter16414017
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
PRPF6AR10686212039962 Affinity Capture-Western; Reconstituted Complex
PRPF6AR11729812039962 Affinity Capture-Western; Reconstituted Complex
PRPF6ARAF11729810848612 12620389 Two-hybrid
PRPF6ARAF10686410848612 12620389 Two-hybrid
PRPF6RAF111729810848612 Two-hybrid
PRPF6RAF111183110848612 Two-hybrid
PRPF6SMARCA211729816341228 Affinity Capture-Western
PRPF6SMARCA211247916341228 Affinity Capture-Western
PRPF6YWHAB11336110848612 Two-hybrid
PRPF6YWHAB11729810848612 Two-hybrid
PRPF6PRPF411729819615732 Affinity Capture-MS
PRPF6PRPF411457619615732 Affinity Capture-MS
PRPF6SNRNP4011729817353931 Affinity Capture-MS
PRPF6SNRNP4011480517353931 Affinity Capture-MS
PRPF6CD2BP211729817353931 Affinity Capture-MS
PRPF6CD2BP211569017353931 Affinity Capture-MS
PRPF6TIMM4411729810848612 Two-hybrid
PRPF6TIMM4411573210848612 Two-hybrid
PRPF6USP3911593919615732 Affinity Capture-MS
PRPF6USP3911729819615732 Affinity Capture-MS
PRPF6RNPS111612517353931 Affinity Capture-MS
PRPF6RNPS111729817353931 Affinity Capture-MS
PRPF6PRPF611729810848612 Two-hybrid
RNU12-2PPRPF611729815146077 Affinity Capture-MS
RNU12-2PPRPF611787215146077 Affinity Capture-MS
RNU11PRPF611729815146077 Affinity Capture-MS
RNU11PRPF611787315146077 Affinity Capture-MS
TXNL4BPRPF612029515161931 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
TXNL4BPRPF611729815161931 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
MEPCEPRPF611729817643375 Affinity Capture-MS
MEPCEPRPF612112217643375 Affinity Capture-MS
GIGYF2PRPF611729820696395 Affinity Capture-MS
GIGYF2PRPF611752020696395 Affinity Capture-MS
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:1922946
  • Data Attributes: MGI curated and HomoloGene calculated
No data