AutismKB 2.0

Annotation Details for XRCC6


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Basic Information Top
Gene Symbol:XRCC6 ( CTC75,CTCBF,G22P1,KU70,ML8,TLAA )
Gene Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Band: 22q13.2
Quick LinksEntrez ID:2547; OMIM: 152690; Uniprot ID:XRCC6_HUMAN; ENSEMBL ID: ENSG00000196419; HGNC ID: 4055
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0000783TAS-nuclear telomere cap complex15100233
GO:0000784IDA-nuclear chromosome, telomeric region19135898
GO:0005576TAS-extracellular region-
GO:0005634TAS-nucleus10508516
GO:0005654IDA-nucleoplasm-
GO:0005654TAS-nucleoplasm-
GO:0005667IDA-transcription factor complex12145306
GO:0005730IEA-nucleolus-
GO:0005829TAS-cytosol-
GO:0016020IDA-membrane19946888
GO:0032993IDA-protein-DNA complex22504299
GO:0034774TAS-secretory granule lumen-
GO:0043234IDA-protein complex22504299
GO:0043564IDA-Ku70:Ku80 complex20383123
GO:0070419IDA-nonhomologous end joining complex20383123
GO:1904813TAS-ficolin-1-rich granule lumen-
GO ID Evidence Qualifier GO_term References
GO:0003677NAS-DNA binding1537839
GO:0003684IEA-damaged DNA binding-
GO:0003690TAS-double-stranded DNA binding7957065
GO:0003691IDAcontributes_todouble-stranded telomeric DNA binding10409678
GO:0003723IDA-RNA binding22658674
GO:0004003IEA-ATP-dependent DNA helicase activity-
GO:0005515IPI-protein binding8621488
GO:0005524IEA-ATP binding-
GO:0008022IPI-protein C-terminus binding10783163
GO:0044212IDA-transcription regulatory region DNA binding18809223
GO:0044877IPI-macromolecular complex binding12377759
GO:0051575IMP-5'-deoxyribose-5-phosphate lyase activity20383123
GO ID Evidence Qualifier GO_term References
GO:0000723TAS-telomere maintenance15824061
GO:0006266TAS-DNA ligation9826654
GO:0006303IMP-double-strand break repair via nonhomologous end joining20383123
GO:0006303TAS-double-strand break repair via nonhomologous end joining15824061
GO:0006310IEA-DNA recombination-
GO:0006351IEA-transcription, DNA-templated-
GO:0007420IEA-brain development-
GO:0032481TAS-positive regulation of type I interferon production-
GO:0032508IEA-DNA duplex unwinding-
GO:0043312TAS-neutrophil degranulation-
GO:0045860IDA-positive regulation of protein kinase activity22504299
GO:0045892IMP-negative regulation of transcription, DNA-templated8621488
GO:0045893IDA-positive regulation of transcription, DNA-templated12145306
GO:0045893IMP-positive regulation of transcription, DNA-templated18809223
GO:0045944IMP-positive regulation of transcription from RNA polymerase II promoter18809223
GO:0048660IMP-regulation of smooth muscle cell proliferation25852083
GO:0051290IDA-protein heterotetramerization24095731
GO:0071475IEA-cellular hyperosmotic salinity response-
GO:0071480IDA-cellular response to gamma radiation26359349
GO:0071481IEA-cellular response to X-ray-
GO:0075713TAS-establishment of integrated proviral latency-
GO:0097680IDA-double-strand break repair via classical nonhomologous end joining24095731
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
XRCC6ABL11065439798959 Affinity Capture-Western
XRCC6ABL11088229798959 Affinity Capture-Western
XRCC6PARP110665210400681 16794079 Affinity Capture-Western; Reconstituted Complex
XRCC6PARP110882210400681 16794079 Affinity Capture-Western; Reconstituted Complex
XRCC6BIN110677117671430 Co-purification
XRCC6BIN110882217671430 Co-purification
XRCC6AR10882215640154 Affinity Capture-Western
XRCC6AR10686215640154 Affinity Capture-Western
XRCC6ATP6V1E110701216169070 Two-hybrid
XRCC6ATP6V1E110882216169070 Two-hybrid
XRCC6BARD110705615782130 Affinity Capture-Western
XRCC6BARD110882215782130 Affinity Capture-Western
XRCC6FMNL110720816169070 Two-hybrid
XRCC6FMNL110882216169070 Two-hybrid
XRCC6RUNX210730812145306 Affinity Capture-Western
XRCC6RUNX210882212145306 Affinity Capture-Western
XRCC6CD4010882210514012 Reconstituted Complex
XRCC6CD4010739610514012 Reconstituted Complex
XRCC6CDK210745215159402 Biochemical Activity
XRCC6CDK210882215159402 Biochemical Activity
XRCC6CHEK110753612756247 Affinity Capture-Western
XRCC6CHEK110882212756247 Affinity Capture-Western
XRCC6CLU10760310219089 12551933 Affinity Capture-Western; Far Western; Reconstituted Complex; Two-hybrid
XRCC6CLU10882210219089 12551933 Affinity Capture-Western; Far Western; Reconstituted Complex; Two-hybrid
XRCC6CREBBP1077779488450 15023334 Affinity Capture-Western; Biochemical Activity; Reconstituted Complex; Two-hybrid
XRCC6CREBBP1088229488450 15023334 Affinity Capture-Western; Biochemical Activity; Reconstituted Complex; Two-hybrid
XRCC6DHX910802515723802 Affinity Capture-Western
XRCC6DHX910882215723802 Affinity Capture-Western
XRCC6DLX210809011279128 Reconstituted Complex
XRCC6DLX210882211279128 Reconstituted Complex
XRCC6DNTT10812710570175 Affinity Capture-Western
XRCC6DNTT10882210570175 Affinity Capture-Western
XRCC6EP30010834715023334 Biochemical Activity
XRCC6EP30010882215023334 Biochemical Activity
XRCC6ESR110840316794079 Affinity Capture-Western
XRCC6ESR110882216794079 Affinity Capture-Western
VAV1XRCC61132528524317 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
VAV1XRCC61088228524317 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
KAT2AXRCC61089189488450 Affinity Capture-Western; Co-fractionation; Reconstituted Complex; Two-hybrid
KAT2AXRCC61088229488450 Affinity Capture-Western; Co-fractionation; Reconstituted Complex; Two-hybrid
XRCC5XRCC61088229488450 10207052 10219089 10446239 10984620 12145306 15023334 15520013 Affinity Capture-Western; Co-fractionation; Reconstituted Complex; Two-hybrid
XRCC5XRCC61133539488450 10207052 10219089 10446239 10984620 12145306 15023334 15520013 Affinity Capture-Western; Co-fractionation; Reconstituted Complex; Two-hybrid
NCF4XRCC61107699914162 Reconstituted Complex; Two-hybrid
NCF4XRCC61088229914162 Reconstituted Complex; Two-hybrid
PRKDCXRCC611157710064605 15520013 Affinity Capture-Western
PRKDCXRCC610882210064605 15520013 Affinity Capture-Western
RPA2XRCC611203810064605 Affinity Capture-Western
RPA2XRCC610882210064605 Affinity Capture-Western
XRCC6BP1XRCC612483010219089 Affinity Capture-Western; Two-hybrid
XRCC6BP1XRCC610882210219089 Affinity Capture-Western; Two-hybrid
MRE11AXRCC610882210508516 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
MRE11AXRCC611050110508516 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
NCOA6XRCC611669110823961 12519782 Affinity Capture-MS; Reconstituted Complex
NCOA6XRCC610882210823961 12519782 Affinity Capture-MS; Reconstituted Complex
WRNXRCC611332310880505 12177300 Affinity Capture-Western; Reconstituted Complex
WRNXRCC610882210880505 12177300 Affinity Capture-Western; Reconstituted Complex
TERF2XRCC611287310984620 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
TERF2XRCC610882210984620 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
CBX5XRCC611703011112778 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
CBX5XRCC610882211112778 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
HSF1XRCC610953011162511 Reconstituted Complex
HSF1XRCC610882211162511 Reconstituted Complex
PTTG1XRCC611466311238996 Reconstituted Complex; Two-hybrid
PTTG1XRCC610882211238996 Reconstituted Complex; Two-hybrid
PCNAXRCC611114211239001 12171929 Affinity Capture-MS; Affinity Capture-Western
PCNAXRCC610882211239001 12171929 Affinity Capture-MS; Affinity Capture-Western
POU2F1XRCC610882211279128 17213819 Affinity Capture-Western
POU2F1XRCC611144711279128 17213819 Affinity Capture-Western
HOXD4XRCC610947311279128 Reconstituted Complex
HOXD4XRCC610882211279128 Reconstituted Complex
HOXC4XRCC610946111279128 Reconstituted Complex; Two-hybrid
HOXC4XRCC610882211279128 Reconstituted Complex; Two-hybrid
POU2F2XRCC610882211279128 Reconstituted Complex; Two-hybrid
POU2F2XRCC611144811279128 Reconstituted Complex; Two-hybrid
MSX2XRCC611059412145306 Affinity Capture-Western
MSX2XRCC610882212145306 Affinity Capture-Western
NAA15XRCC610882212145306 Affinity Capture-Western
NAA15XRCC612314612145306 Affinity Capture-Western
TERTXRCC611287412377759 Affinity Capture-Western; Reconstituted Complex
TERTXRCC610882212377759 Affinity Capture-Western; Reconstituted Complex
KAT2BXRCC611437515023334 Biochemical Activity
KAT2BXRCC610882215023334 Biochemical Activity
TERF2IPXRCC610882215100233 Affinity Capture-MS
TERF2IPXRCC611994215100233 Affinity Capture-MS
CCNA1XRCC611441715159402 Two-hybrid
CCNA1XRCC610882215159402 Two-hybrid
LIG4XRCC611016915520013 Affinity Capture-Western
LIG4XRCC610882215520013 Affinity Capture-Western
XRCC4XRCC611335215520013 Affinity Capture-Western
XRCC4XRCC610882215520013 Affinity Capture-Western
H2AFXXRCC610926815613478 18406329 Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex
H2AFXXRCC610882215613478 18406329 Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex
TP53XRCC610882215782130 Affinity Capture-Western
TP53XRCC611301015782130 Affinity Capture-Western
WBP4XRCC611636316055720 Affinity Capture-MS
WBP4XRCC610882216055720 Affinity Capture-MS
PIN1XRCC611131716055720 Affinity Capture-MS
PIN1XRCC610882216055720 Affinity Capture-MS
PRPF40AXRCC610882216055720 Affinity Capture-MS
PRPF40AXRCC612079216055720 Affinity Capture-MS
SRRM2XRCC611707116159877 Affinity Capture-MS
SRRM2XRCC610882216159877 Affinity Capture-MS
PDX1XRCC610986016166097 Affinity Capture-Western; Reconstituted Complex
PDX1XRCC610882216166097 Affinity Capture-Western; Reconstituted Complex
ILVBLXRCC610882216169070 Two-hybrid
ILVBLXRCC611619016169070 Two-hybrid
CDCA5XRCC612522516169070 Two-hybrid
CDCA5XRCC610882216169070 Two-hybrid
ARAP1XRCC610882216169070 Two-hybrid
ARAP1XRCC612554816169070 Two-hybrid
RRAS2XRCC611648016169070 Two-hybrid
RRAS2XRCC610882216169070 Two-hybrid
KIAA0182XRCC610882216169070 Two-hybrid
KIAA0182XRCC611680816169070 Two-hybrid
NHP2L1XRCC611087416169070 Two-hybrid
NHP2L1XRCC610882216169070 Two-hybrid
NIT1XRCC610882216169070 Two-hybrid
NIT1XRCC611088216169070 Two-hybrid
NOTCH1XRCC611091316169070 Two-hybrid
NOTCH1XRCC610882216169070 Two-hybrid
PAEPXRCC611108416169070 Two-hybrid
PAEPXRCC610882216169070 Two-hybrid
PAFAH1B3XRCC611108716169070 Two-hybrid
PAFAH1B3XRCC610882216169070 Two-hybrid
PECAM1XRCC611120116169070 Two-hybrid
PECAM1XRCC610882216169070 Two-hybrid
PGAM1XRCC611124416169070 Two-hybrid
PGAM1XRCC610882216169070 Two-hybrid
SERPINB9XRCC611129016169070 Two-hybrid
SERPINB9XRCC610882216169070 Two-hybrid
C9orf46XRCC612095016169070 Two-hybrid
C9orf46XRCC610882216169070 Two-hybrid
ABCD4XRCC610882216169070 Two-hybrid
ABCD4XRCC611178416169070 Two-hybrid
RBBP4XRCC611186316169070 Two-hybrid
RBBP4XRCC610882216169070 Two-hybrid
RPLP1XRCC610882216169070 Two-hybrid
RPLP1XRCC611209516169070 Two-hybrid
ACDXRCC610882216169070 Two-hybrid
ACDXRCC612237916169070 Two-hybrid
SNTA1XRCC611252316169070 Two-hybrid
SNTA1XRCC610882216169070 Two-hybrid
TBCDXRCC610882216169070 Two-hybrid
TBCDXRCC611276716169070 Two-hybrid
YWHAZXRCC610882216169070 Two-hybrid
YWHAZXRCC611336616169070 Two-hybrid
GAL3ST4XRCC610882216169070 Two-hybrid
GAL3ST4XRCC612281116169070 Two-hybrid
MGMTXRCC610882216226712 Affinity Capture-MS
MGMTXRCC611041116226712 Affinity Capture-MS
TAL1XRCC611274916407974 Affinity Capture-MS
TAL1XRCC610882216407974 Affinity Capture-MS
ILF2XRCC610982117389650 Affinity Capture-Western
ILF2XRCC610882217389650 Affinity Capture-Western
ATXN3XRCC610882217885668 Affinity Capture-Western
ATXN3XRCC611043317885668 Affinity Capture-Western
PHF1XRCC611127118385154 Affinity Capture-Western
PHF1XRCC610882218385154 Affinity Capture-Western
SIRT3XRCC610882218710944 Affinity Capture-Western; Biochemical Activity; Reconstituted Complex
SIRT3XRCC611698218710944 Affinity Capture-Western; Biochemical Activity; Reconstituted Complex
FCHSD1XRCC612461919041431 Affinity Capture-MS
FCHSD1XRCC610882219041431 Affinity Capture-MS
SUMO2XRCC611249719394292 Affinity Capture-MS
SUMO2XRCC610882219394292 Affinity Capture-MS
CHD1LXRCC611492919661379 19666485 Affinity Capture-MS; Affinity Capture-Western
CHD1LXRCC610882219661379 19666485 Affinity Capture-MS; Affinity Capture-Western
NR1H4XRCC611529619833092 Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex
NR1H4XRCC610882219833092 Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex
SIRT6XRCC611960320157594 Affinity Capture-MS; Affinity Capture-Western
SIRT6XRCC610882220157594 Affinity Capture-MS; Affinity Capture-Western
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:95606
  • Data Attributes: MGI curated and HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-030131-6420'