AutismKB 2.0

Annotation Details for LSM1


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Basic Information Top
Gene Symbol:LSM1 ( CASM,YJL124C )
Gene Full Name: LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Band: 8p11.23
Quick LinksEntrez ID:27257; OMIM: 607281; Uniprot ID:LSM1_HUMAN; ENSEMBL ID: ENSG00000175324; HGNC ID: 20472
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0000932IBA-P-body-
GO:0005634IDA-nucleus18559850
GO:0005737IDA-cytoplasm18559850
GO:0005829TAS-cytosol-
GO:0030424IEA-axon-
GO:0030425IEA-dendrite-
GO:0043025IEA-neuronal cell body-
GO:1990124IEA-messenger ribonucleoprotein complex-
GO ID Evidence Qualifier GO_term References
GO:0000339IBA-RNA cap binding-
GO:0003723IDA-RNA binding22658674
GO:0003729IEA-mRNA binding-
GO:0005515IPI-protein binding15231747
GO:0036002IEA-pre-mRNA binding-
GO ID Evidence Qualifier GO_term References
GO:0000290IBA-deadenylation-dependent decapping of nuclear-transcribed mRNA-
GO:0000375TAS-RNA splicing, via transesterification reactions10369684
GO:0006397IEA-mRNA processing-
GO:0008380TAS-RNA splicing10369684
GO:0019827IEA-stem cell population maintenance-
GO:0043928TAS-exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay-
GO:0045665IEA-negative regulation of neuron differentiation-
GO:0071044IMP-histone mRNA catabolic process18172165
Protein-Protein Interaction Top
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:1914457
  • Data Attributes: HomoloGene calculated
No data
No data

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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