Annotation Details for LSM3


Gene Symbol: | LSM3 ( SMX4,USS2,YLR438C ) |
---|---|
Gene Full Name: | LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) |
Band: | 3p25.1 |
Quick Links | Entrez ID:27258; OMIM: 607283; Uniprot ID:LSM3_HUMAN; ENSEMBL ID: ENSG00000170860; HGNC ID: 17874 |
Relate to Another Database: | SFARIGene; denovo-db |
GO ID | Evidence | Qualifier | GO_term | References |
---|---|---|---|---|
GO:0000932 | IBA | - | P-body | - |
GO:0005634 | TAS | - | nucleus | 10369684 |
GO:0005654 | TAS | - | nucleoplasm | - |
GO:0005688 | IBA | - | U6 snRNP | - |
GO:0005829 | TAS | - | cytosol | - |
GO:0046540 | IBA | - | U4/U6 x U5 tri-snRNP complex | - |
GO:0071011 | IBA | - | precatalytic spliceosome | - |
GO:0071013 | IDA | - | catalytic step 2 spliceosome | 11991638 |
GO:1990726 | IBA | - | Lsm1-7-Pat1 complex | - |
GO ID | Evidence | Qualifier | GO_term | References |
---|---|---|---|---|
GO:0003723 | IBA | - | RNA binding | - |
GO:0003723 | IDA | - | RNA binding | 22658674 |
GO:0005515 | IPI | - | protein binding | 14667819 |
GO ID | Evidence | Qualifier | GO_term | References |
---|---|---|---|---|
GO:0000398 | IBA | - | mRNA splicing, via spliceosome | - |
GO:0000398 | IC | - | mRNA splicing, via spliceosome | 11991638 |
GO:0000398 | TAS | - | mRNA splicing, via spliceosome | - |
GO:0006397 | TAS | - | mRNA processing | 10369684 |
GO:0033962 | IBA | - | cytoplasmic mRNA processing body assembly | - |
GO:0043928 | TAS | - | exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay | - |
Gene Symbol | Interactant | Interaction ID | References | Description |
---|---|---|---|---|
LSM3 | EEF1A1 | 108237 | 16169070 | Two-hybrid |
LSM3 | EEF1A1 | 118105 | 16169070 | Two-hybrid |
LSM3 | GDF9 | 118105 | 16169070 | Two-hybrid |
LSM3 | GDF9 | 108930 | 16169070 | Two-hybrid |
LSM3 | SNRPD3 | 112518 | 15231747 | Two-hybrid |
LSM3 | SNRPD3 | 118105 | 15231747 | Two-hybrid |
LSM3 | SNRPE | 112519 | 15231747 | Two-hybrid |
LSM3 | SNRPE | 118105 | 15231747 | Two-hybrid |
LSM3 | XPC | 118105 | 15231747 | Two-hybrid |
LSM3 | XPC | 113345 | 15231747 | Two-hybrid |
LSM3 | UTP14A | 116026 | 16169070 | Two-hybrid |
LSM3 | UTP14A | 118105 | 16169070 | Two-hybrid |
LSM3 | XRN2 | 116483 | 15231747 | Two-hybrid |
LSM3 | XRN2 | 118105 | 15231747 | Two-hybrid |
LSM3 | LSM4 | 118105 | 11920408 | Affinity Capture-Western |
LSM3 | LSM4 | 117336 | 11920408 | Affinity Capture-Western |
LSM2 | LSM3 | 118105 | 14667819 15231747 16169070 16189514 | Two-hybrid |
LSM2 | LSM3 | 121778 | 14667819 15231747 16169070 16189514 | Two-hybrid |
LSM7 | LSM3 | 118105 | 15231747 | Two-hybrid |
LSM7 | LSM3 | 119678 | 15231747 | Two-hybrid |
LSM10 | LSM3 | 124397 | 15231747 16189514 | Two-hybrid |
LSM10 | LSM3 | 118105 | 15231747 16189514 | Two-hybrid |
MEPCE | LSM3 | 118105 | 17643375 | Affinity Capture-MS |
MEPCE | LSM3 | 121122 | 17643375 | Affinity Capture-MS |
No data |
No data |