AutismKB 2.0

Annotation Details for PRPF40A


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Basic Information Top
Gene Symbol:PRPF40A ( FBP-11,FBP11,FLAF1,FLJ20585,FNBP3,HIP-10,HIP10,HYPA,NY-REN-6,Prp40 )
Gene Full Name: PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
Band: 2q23.3
Quick LinksEntrez ID:55660; OMIM: 612941; Uniprot ID:PR40A_HUMAN; ENSEMBL ID: ENSG00000196504; HGNC ID: 16463
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005654TAS-nucleoplasm-
GO:0005685IBA-U1 snRNP-
GO:0005829IDA-cytosol-
GO:0016020IDA-membrane19946888
GO:0016363IDA-nuclear matrix16391387
GO:0016607IDA-nuclear speck-
GO:0071004IBA-U2-type prespliceosome-
GO ID Evidence Qualifier GO_term References
GO:0003723IBA-RNA binding-
GO:0003723IDA-RNA binding22681889
GO:0005515IPI-protein binding15383276
GO:0070064IEA-proline-rich region binding-
GO ID Evidence Qualifier GO_term References
GO:0000398IBA-mRNA splicing, via spliceosome-
GO:0000398TAS-mRNA splicing, via spliceosome-
GO:0007010IMP-cytoskeleton organization21834987
GO:0007049IEA-cell cycle-
GO:0008360IMP-regulation of cell shape21834987
GO:0016477IMP-cell migration21834987
GO:0032465IMP-regulation of cytokinesis21834987
GO:0051301IEA-cell division-
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
PRPF40AZFHX31069549171351 Far Western
PRPF40AZFHX31207929171351 Far Western
PRPF40AFMNL110720816055720 Affinity Capture-MS
PRPF40AFMNL112079216055720 Affinity Capture-MS
PRPF40ADHX912079216055720 Affinity Capture-MS
PRPF40ADHX910802516055720 Affinity Capture-MS
PRPF40ADHX1510802916055720 Affinity Capture-MS
PRPF40ADHX1512079216055720 Affinity Capture-MS
PRPF40ADIAPH110807316055720 Affinity Capture-MS
PRPF40ADIAPH112079216055720 Affinity Capture-MS
PRPF40AXRCC610882216055720 Affinity Capture-MS
PRPF40AXRCC612079216055720 Affinity Capture-MS
PRPF40AGAPDH10886816055720 Affinity Capture-MS
PRPF40AGAPDH12079216055720 Affinity Capture-MS
PRPF40AHTT1093149700202 Reconstituted Complex; Two-hybrid
PRPF40AHTT1207929700202 Reconstituted Complex; Two-hybrid
PRPF40ANCKAP1L10932116055720 Affinity Capture-MS
PRPF40ANCKAP1L12079216055720 Affinity Capture-MS
PRPF40AHNRNPF10942616055720 Affinity Capture-MS
PRPF40AHNRNPF12079216055720 Affinity Capture-MS
PRPF40AHNRNPK10943116055720 Affinity Capture-MS
PRPF40AHNRNPK12079216055720 Affinity Capture-MS
PRPF40AHNRNPU10943316055720 Affinity Capture-MS
PRPF40AHNRNPU12079216055720 Affinity Capture-MS
PRPF40AMECP21103689171351 14618241 Affinity Capture-Western; Far Western; Reconstituted Complex
PRPF40AMECP21207929171351 14618241 Affinity Capture-Western; Far Western; Reconstituted Complex
PRPF40ANONO11090416055720 Affinity Capture-MS
PRPF40ANONO12079216055720 Affinity Capture-MS
PRPF40AYBX111095916055720 Affinity Capture-MS
PRPF40AYBX112079216055720 Affinity Capture-MS
PRPF40ASERPINB911129016169070 Two-hybrid
PRPF40ASERPINB912079216169070 Two-hybrid
PRPF40ARNU1-411198715456888 Affinity Capture-RNA
PRPF40ARNU1-412079215456888 Affinity Capture-RNA
PRPF40ARNU2-111199315456888 Affinity Capture-RNA
PRPF40ARNU2-112079215456888 Affinity Capture-RNA
PRPF40ARPL411204416055720 Affinity Capture-MS
PRPF40ARPL412079216055720 Affinity Capture-MS
PRPF40ARPLP012079216055720 Affinity Capture-MS
PRPF40ARPLP011209416055720 Affinity Capture-MS
PRPF40ASFPQ11231916055720 Affinity Capture-MS
PRPF40ASFPQ12079216055720 Affinity Capture-MS
PRPF40AVASP11325116055720 Affinity Capture-MS
PRPF40AVASP12079216055720 Affinity Capture-MS
PRPF40AWAS11329316055720 Affinity Capture-MS
PRPF40AWAS12079216055720 Affinity Capture-MS
PRPF40AWIPF111329516055720 Affinity Capture-MS
PRPF40AWIPF112079216055720 Affinity Capture-MS
PRPF40ASF111336816055720 Affinity Capture-MS
PRPF40ASF112079216055720 Affinity Capture-MS
PRPF40ASF3A211382616055720 Affinity Capture-MS
PRPF40ASF3A212079216055720 Affinity Capture-MS
PRPF40AWASL11446616055720 Affinity Capture-MS
PRPF40AWASL12079216055720 Affinity Capture-MS
PRPF40ADDX4611521016055720 Affinity Capture-MS
PRPF40ADDX4612079216055720 Affinity Capture-MS
PRPF40AABI111532416055720 Affinity Capture-MS
PRPF40AABI112079216055720 Affinity Capture-MS
PRPF40AWASF211546516055720 Affinity Capture-MS
PRPF40AWASF212079216055720 Affinity Capture-MS
PRPF40ASRRM111554416159877 Affinity Capture-MS
PRPF40ASRRM112079216159877 Affinity Capture-MS
PRPF40ASF3B411555416055720 Affinity Capture-MS
PRPF40ASF3B412079216055720 Affinity Capture-MS
PRPF40ASF3A111558016055720 Affinity Capture-MS
PRPF40ASF3A112079216055720 Affinity Capture-MS
PRPF40ACCT711582516055720 Affinity Capture-MS
PRPF40ACCT712079216055720 Affinity Capture-MS
PRPF40ACCT411582616055720 Affinity Capture-MS
PRPF40ACCT412079216055720 Affinity Capture-MS
PRPF40ACCT212079216055720 Affinity Capture-MS
PRPF40ACCT211582716055720 Affinity Capture-MS
PRPF40ARNPS111612517353931 Affinity Capture-MS
PRPF40ARNPS112079217353931 Affinity Capture-MS
PRPF40ASF3A312079216055720 Affinity Capture-MS
PRPF40ASF3A311614616055720 Affinity Capture-MS
PRPF40ASF3B212079216055720 Affinity Capture-MS
PRPF40ASF3B211618816055720 Affinity Capture-MS
PRPF40ACPSF612079216055720 Affinity Capture-MS
PRPF40ACPSF611623816055720 Affinity Capture-MS
PRPF40AHNRNPUL111628116169070 Two-hybrid
PRPF40AHNRNPUL112079216169070 Two-hybrid
PRPF40AU2AF212079216055720 Affinity Capture-MS
PRPF40AU2AF211646616055720 Affinity Capture-MS
PRPF40ACYFIP111680016055720 Affinity Capture-MS
PRPF40ACYFIP112079216055720 Affinity Capture-MS
PRPF40ASF3B312079216055720 Affinity Capture-MS
PRPF40ASF3B311701616055720 Affinity Capture-MS
PRPF40ASF3B112079216055720 Affinity Capture-MS
PRPF40ASF3B111701716055720 Affinity Capture-MS
PRPF40ASRRM212079216159877 Affinity Capture-MS
PRPF40ASRRM211707116159877 Affinity Capture-MS
PRPF40ACYFIP211794516055720 Affinity Capture-MS
PRPF40ACYFIP212079216055720 Affinity Capture-MS
PRPF40AWBP51193619171351 Far Western
PRPF40AWBP51207929171351 Far Western
PRPF40AEVL12079216055720 Affinity Capture-MS
PRPF40AEVL11955616055720 Affinity Capture-MS
PRPF40ACDK1212079216055720 Affinity Capture-MS
PRPF40ACDK1211971516055720 Affinity Capture-MS
PRPF40AAPBB1IP12079216055720 Affinity Capture-MS
PRPF40AAPBB1IP12001216055720 Affinity Capture-MS
PRPF40AATAD3A12079216055720 Affinity Capture-MS
PRPF40AATAD3A12050616055720 Affinity Capture-MS
FMNL3PRPF40A1207929171351 Far Western
FMNL3PRPF40A1247879171351 Far Western
FMN1PRPF40A13116711604498 Protein-peptide
FMN1PRPF40A12079211604498 Protein-peptide
RCC2PRPF40A12100116055720 Affinity Capture-MS
RCC2PRPF40A12079216055720 Affinity Capture-MS
YLPM1PRPF40A12079216055720 Affinity Capture-MS
YLPM1PRPF40A12111716055720 Affinity Capture-MS
Gene Symbol Interactant Interaction ID References Description
PRPF40AHTT543769700202 Huntingtin interacts with HYPA
Gene Symbol Interactant Interaction ID References Description
PRPF40AFNBP41099515231748 -
PRPF40AFNBP41099615231748 -
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:1860512
  • Data Attributes: HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-030131-274'