AutismKB 2.0

Annotation Details for SAFB


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Basic Information Top
Gene Symbol:SAFB ( DKFZp779C1727,HAP,HET,SAF-B1,SAFB1 )
Gene Full Name: scaffold attachment factor B
Band: 19p13.3
Quick LinksEntrez ID:6294; OMIM: 602895; Uniprot ID:SAFB1_HUMAN; ENSEMBL ID: ENSG00000160633; HGNC ID: 10520
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005634TAS-nucleus1324173
GO:0005654IDA-nucleoplasm-
GO ID Evidence Qualifier GO_term References
GO:0001047IEA-core promoter binding-
GO:0003682IEA-chromatin binding-
GO:0003690TAS-double-stranded DNA binding1324173
GO:0003723IDA-RNA binding22658674
GO:0005515IPI-protein binding12660241
GO:0043565IBA-sequence-specific DNA binding-
GO ID Evidence Qualifier GO_term References
GO:0006325TAS-chromatin organization1324173
GO:0006351IEA-transcription, DNA-templated-
GO:0006357IBA-regulation of transcription from RNA polymerase II promoter-
GO:0030520IBA-intracellular estrogen receptor signaling pathway-
GO:0040007IEA-growth-
GO:0042445IEA-hormone metabolic process-
GO:0045944IEA-positive regulation of transcription from RNA polymerase II promoter-
GO:0050684IBA-regulation of mRNA processing-
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
SAFBCHD111220112890497 Two-hybrid
SAFBCHD110753012890497 Two-hybrid
SAFBCHD311220116169070 Two-hybrid
SAFBCHD310753216169070 Two-hybrid
SAFBCLK111220112890497 Two-hybrid
SAFBCLK110760612890497 Two-hybrid
SAFBESR111220110707955 15066997 Affinity Capture-Western; Reconstituted Complex
SAFBESR110840310707955 15066997 Affinity Capture-Western; Reconstituted Complex
SAFBHNRNPA111220110212141 Reconstituted Complex
SAFBHNRNPA110942010212141 Reconstituted Complex
SAFBHNRNPD11220110933876 Reconstituted Complex; Two-hybrid
SAFBHNRNPD10942510933876 Reconstituted Complex; Two-hybrid
SAFB2SAFB11220112660241 Affinity Capture-Western; Two-hybrid
SAFB2SAFB11502212660241 Affinity Capture-Western; Two-hybrid
BAT5SAFB11220114667819 Two-hybrid
BAT5SAFB11365014667819 Two-hybrid
TAF15SAFB11220115066997 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
TAF15SAFB11380715066997 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
SRRM1SAFB11220116159877 Affinity Capture-MS
SRRM1SAFB11554416159877 Affinity Capture-MS
HDAC3SAFB11220116195251 Affinity Capture-Western
HDAC3SAFB11436816195251 Affinity Capture-Western
NCOR1SAFB11220116195251 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
NCOR1SAFB11497316195251 Affinity Capture-Western; Reconstituted Complex; Two-hybrid
KHDRBS2SAFB11220117643375 Affinity Capture-MS
KHDRBS2SAFB12843617643375 Affinity Capture-MS
USP45SAFB11220119615732 Affinity Capture-MS
USP45SAFB12443019615732 Affinity Capture-MS
RB1CC1SAFB11220120562859 Affinity Capture-MS
RB1CC1SAFB11516020562859 Affinity Capture-MS
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:2146974
  • Data Attributes: HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-030131-698'