AutismKB 2.0

Annotation Details for TRA2B


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Basic Information Top
Gene Symbol:TRA2B ( DKFZp686F18120,Htra2-beta,SFRS10,SRFS10,TRA2-BETA,TRAN2B )
Gene Full Name: transformer 2 beta homolog (Drosophila)
Band: 3q27.2
Quick LinksEntrez ID:6434; OMIM: 602719; Uniprot ID:TRA2B_HUMAN; ENSEMBL ID: ENSG00000136527; HGNC ID: 10781
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005634IDA-nucleus9546399
GO:0005637IEA-nuclear inner membrane-
GO:0005654IDA-nucleoplasm-
GO:0005654TAS-nucleoplasm-
GO:0005681IMP-spliceosomal complex25689357
GO:0048471IEA-perinuclear region of cytoplasm-
GO ID Evidence Qualifier GO_term References
GO:0003723IDA-RNA binding22658674
GO:0003723IMP-RNA binding10749975
GO:0003729IDA-mRNA binding12165565
GO:0005515IPI-protein binding10749975
GO:0019904IPI-protein domain specific binding10749975
GO:0036002IDA-pre-mRNA binding25689357
GO:0042802IDA-identical protein binding10749975
GO:0070717IEA-poly-purine tract binding-
GO ID Evidence Qualifier GO_term References
GO:0000302IEA-response to reactive oxygen species-
GO:0000375TAS-RNA splicing, via transesterification reactions9546399
GO:0000381IDA-regulation of alternative mRNA splicing, via spliceosome12165565
GO:0000381IMP-regulation of alternative mRNA splicing, via spliceosome25689357
GO:0000398IDA-mRNA splicing, via spliceosome9546399
GO:0000398TAS-mRNA splicing, via spliceosome-
GO:0021796IEA-cerebral cortex regionalization-
GO:0043484IMP-regulation of RNA splicing10749975
GO:0048025IEA-negative regulation of mRNA splicing, via spliceosome-
GO:0048026IDA-positive regulation of mRNA splicing, via spliceosome15009664
GO:0051259IDA-protein oligomerization10749975
GO:0071333IMP-cellular response to glucose stimulus25689357
GO:1990403IEA-embryonic brain development-
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
ZRANB2TRA2B11233211448987 Protein-RNA
ZRANB2TRA2B11480211448987 Protein-RNA
SRSF9TRA2B11233211875052 Reconstituted Complex
SRSF9TRA2B11423111875052 Reconstituted Complex
RBMXTRA2B11233212165565 Affinity Capture-Western; Reconstituted Complex
RBMXTRA2B11813412165565 Affinity Capture-Western; Reconstituted Complex
RNPS1TRA2B11233217353931 Affinity Capture-MS
RNPS1TRA2B11612517353931 Affinity Capture-MS
YWHAZTRA2B11233217353931 Affinity Capture-MS
YWHAZTRA2B11336617353931 Affinity Capture-MS
BANF1TRA2B11233219759913 Affinity Capture-MS
BANF1TRA2B11434219759913 Affinity Capture-MS
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:106016
  • Data Attributes: HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-040426-1094'