AutismKB 2.0

Annotation Details for SNAPC4


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Basic Information Top
Gene Symbol:SNAPC4 ( FLJ13451,PTFalpha,SNAP190 )
Gene Full Name: small nuclear RNA activating complex, polypeptide 4, 190kDa
Band: 9q34.3
Quick LinksEntrez ID:6621; OMIM: 602777; Uniprot ID:SNPC4_HUMAN; ENSEMBL ID: ENSG00000165684; HGNC ID: 11137
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005634IC-nucleus11056176
GO:0005654TAS-nucleoplasm-
GO:0019185IDA-snRNA-activating protein complex9418884
GO ID Evidence Qualifier GO_term References
GO:0000981IBA-RNA polymerase II transcription factor activity, sequence-specific DNA binding-
GO:0001135IBA-transcription factor activity, RNA polymerase II transcription factor recruiting-
GO:0003677IDA-DNA binding11056176
GO:0003700TAS-transcription factor activity, sequence-specific DNA binding9418884
GO:0043565IBA-sequence-specific DNA binding-
GO:0044212IBA-transcription regulatory region DNA binding-
GO ID Evidence Qualifier GO_term References
GO:0006357IBA-regulation of transcription from RNA polymerase II promoter-
GO:0006366TAS-transcription from RNA polymerase II promoter9418884
GO:0006383TAS-transcription from RNA polymerase III promoter9418884
GO:0009301TAS-snRNA transcription9418884
GO:0030154IBA-cell differentiation-
GO:0042795IDA-snRNA transcription from RNA polymerase II promoter9418884
GO:0042795TAS-snRNA transcription from RNA polymerase II promoter-
GO:0042796IDA-snRNA transcription from RNA polymerase III promoter9418884
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
SNAPC4POU2F11114479418884 11856838 Co-crystal Structure; Two-hybrid
SNAPC4POU2F11125059418884 11856838 Co-crystal Structure; Two-hybrid
SNAPC4SNAPC111250111056176 Reconstituted Complex
SNAPC4SNAPC111250511056176 Reconstituted Complex
SNAPC4SNAPC21125029418884 11056176 Reconstituted Complex
SNAPC4SNAPC21125059418884 11056176 Reconstituted Complex
SNAPC5SNAPC411559011056176 Reconstituted Complex
SNAPC5SNAPC411250511056176 Reconstituted Complex
TBPSNAPC411277112621023 Reconstituted Complex
TBPSNAPC411250512621023 Reconstituted Complex
TAF10SNAPC411274417643375 Affinity Capture-MS
TAF10SNAPC411250517643375 Affinity Capture-MS
ATG16L1SNAPC412037520562859 Affinity Capture-MS
ATG16L1SNAPC411250520562859 Affinity Capture-MS
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:2443935
  • Data Attributes: HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-030131-5794'