AutismKB 2.0

Annotation Details for SNRPD3


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Basic Information Top
Gene Symbol:SNRPD3 ( SMD3,Sm-D3 )
Gene Full Name: small nuclear ribonucleoprotein D3 polypeptide 18kDa
Band: 22q11.23
Quick LinksEntrez ID:6634; OMIM: 601062; Uniprot ID:SMD3_HUMAN; ENSEMBL ID: ENSG00000100028; HGNC ID: 11160
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0000243IBA-commitment complex-
GO:0005654IDA-nucleoplasm-
GO:0005654TAS-nucleoplasm-
GO:0005681TAS-spliceosomal complex7527560
GO:0005682IBA-U5 snRNP-
GO:0005683IDA-U7 snRNP11574479
GO:0005685IDA-U1 snRNP21113136
GO:0005686IBA-U2 snRNP-
GO:0005687IDA-U4 snRNP21516107
GO:0005689IDA-U12-type spliceosomal complex15146077
GO:0005697IDAcolocalizes_withtelomerase holoenzyme complex18082603
GO:0005829IDA-cytosol18984161
GO:0005829TAS-cytosol-
GO:0016604IDA-nuclear body-
GO:0030532TAS-small nuclear ribonucleoprotein complex1701240
GO:0034709IDA-methylosome18984161
GO:0034715IDA-pICln-Sm protein complex18984161
GO:0034719IDA-SMN-Sm protein complex18984161
GO:0070062IDA-extracellular exosome23376485
GO:0071010IBA-prespliceosome-
GO:0071011IBA-precatalytic spliceosome-
GO:0071013IDA-catalytic step 2 spliceosome11991638
GO:0097526IBA-spliceosomal tri-snRNP complex-
GO ID Evidence Qualifier GO_term References
GO:0003723IDA-RNA binding22681889
GO:0005515IPI-protein binding11714716
GO:0019899IPI-enzyme binding17709427
GO:0030620IPI-U2 snRNA binding18082603
GO:0070034IPI-telomerase RNA binding18082603
GO:0071208ISS-histone pre-mRNA DCP binding-
GO:0071209IPI-U7 snRNA binding18082603
GO:1990446IEA-U1 snRNP binding-
GO ID Evidence Qualifier GO_term References
GO:0000245IBA-spliceosomal complex assembly-
GO:0000387IDA-spliceosomal snRNP assembly18984161
GO:0000387TAS-spliceosomal snRNP assembly-
GO:0000398IC-mRNA splicing, via spliceosome11991638
GO:0000398TAS-mRNA splicing, via spliceosome-
GO:0006369TAS-termination of RNA polymerase II transcription-
GO:0006479IDA-protein methylation18495660
GO:0008334TAS-histone mRNA metabolic process-
GO:0008380TAS-RNA splicing1701240
GO:0051170TAS-nuclear import-
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
SNRPD3AIRE11251820085707 Affinity Capture-MS
SNRPD3AIRE10682320085707 Affinity Capture-MS
SNRPD3CDC5L10742411101529 Affinity Capture-MS; Co-purification
SNRPD3CDC5L11251811101529 Affinity Capture-MS; Co-purification
SNRPD3CLNS1A11251811713266 19520849 Affinity Capture-Western; Co-purification; Reconstituted Complex
SNRPD3CLNS1A10761711713266 19520849 Affinity Capture-Western; Co-purification; Reconstituted Complex
SNRPD3SMN111251810851237 Reconstituted Complex
SNRPD3SMN111249010851237 Reconstituted Complex
SNRPD3SMN211251810556282 Reconstituted Complex
SNRPD3SMN211249110556282 Reconstituted Complex
SNRPD3SNRPB11251810025403 Co-crystal Structure
SNRPD3SNRPB11251210025403 Co-crystal Structure
SNRPESNRPD31125189417867 Two-hybrid
SNRPESNRPD31125199417867 Two-hybrid
SNRPGSNRPD31125189417867 Two-hybrid
SNRPGSNRPD31125219417867 Two-hybrid
SNRPNSNRPD31125189417867 Two-hybrid
SNRPNSNRPD31125229417867 Two-hybrid
DDX20SNRPD311251810601333 Affinity Capture-Western; Reconstituted Complex
DDX20SNRPD311638710601333 Affinity Capture-Western; Reconstituted Complex
PRMT5SNRPD311251811713266 Affinity Capture-MS; Reconstituted Complex
PRMT5SNRPD311568811713266 Affinity Capture-MS; Reconstituted Complex
GEMIN5SNRPD311251811714716 Reconstituted Complex
GEMIN5SNRPD311742911714716 Reconstituted Complex
WDR77SNRPD311251811756452 Reconstituted Complex
WDR77SNRPD312253211756452 Reconstituted Complex
SF3A2SNRPD311251812234937 Affinity Capture-MS
SF3A2SNRPD311382612234937 Affinity Capture-MS
LSM10SNRPD311251812975319 Affinity Capture-MS
LSM10SNRPD312439712975319 Affinity Capture-MS
RNU12-2PSNRPD311251815146077 Affinity Capture-MS
RNU12-2PSNRPD311787215146077 Affinity Capture-MS
RNU11SNRPD311251815146077 Affinity Capture-MS
RNU11SNRPD311787315146077 Affinity Capture-MS
LSM3SNRPD311251815231747 Two-hybrid
LSM3SNRPD311810515231747 Two-hybrid
LSM7SNRPD311251815231747 Two-hybrid
LSM7SNRPD311967815231747 Two-hybrid
SRRM1SNRPD311251816159877 Affinity Capture-MS
SRRM1SNRPD311554416159877 Affinity Capture-MS
SRRM2SNRPD311251816159877 Affinity Capture-MS
SRRM2SNRPD311707116159877 Affinity Capture-MS
MEPCESNRPD311251817643375 Affinity Capture-MS
MEPCESNRPD312112217643375 Affinity Capture-MS
BANF1SNRPD311251819759913 Affinity Capture-MS
BANF1SNRPD311434219759913 Affinity Capture-MS
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:1914582
  • Data Attributes: MGI curated and HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-040625-55'