AutismKB 2.0

Annotation Details for VIM


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Basic Information Top
Gene Symbol:VIM ( FLJ36605 )
Gene Full Name: vimentin
Band: 10p13
Quick LinksEntrez ID:7431; OMIM: 193060; Uniprot ID:VIME_HUMAN; ENSEMBL ID: ENSG00000026025; HGNC ID: 12692
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005737IDA-cytoplasm9150946
GO:0005777IDA-peroxisome17881773
GO:0005829IDA-cytosol19270731
GO:0005829TAS-cytosol-
GO:0005856IDA-cytoskeleton16769727
GO:0005856TAS-cytoskeleton16130169
GO:0005882IDA-intermediate filament11889032
GO:0005886IDAcolocalizes_withplasma membrane19270731
GO:0005925IDA-focal adhesion21423176
GO:0031012IDA-extracellular matrix23979707
GO:0031252IEA-cell leading edge-
GO:0043005IEA-neuron projection-
GO:0070062IDA-extracellular exosome20458337
GO ID Evidence Qualifier GO_term References
GO:0001948IPI-glycoprotein binding19420356
GO:0003725IDA-double-stranded RNA binding21266579
GO:0005200IDA-structural constituent of cytoskeleton11889032
GO:0005212IEA-structural constituent of eye lens-
GO:0005515IPI-protein binding10852826
GO:0008022IPI-protein C-terminus binding19270731
GO:0042802IPI-identical protein binding15383276
GO:0097110IPI-scaffold protein binding10852826
GO:1990254IPI-keratin filament binding15846844
GO ID Evidence Qualifier GO_term References
GO:0006928TAS-movement of cell or subcellular component16130169
GO:0010628IEA-positive regulation of gene expression-
GO:0010977IEA-negative regulation of neuron projection development-
GO:0014002IEA-astrocyte development-
GO:0016032IEA-viral process-
GO:0030049TAS-muscle filament sliding-
GO:0045109IEA-intermediate filament organization-
GO:0060020IEA-Bergmann glial cell differentiation-
GO:0060395IEA-SMAD protein signal transduction-
GO:0070307IEA-lens fiber cell development-
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
VIMACTA110657311441066 Affinity Capture-Western
VIMACTA111327211441066 Affinity Capture-Western
VIMSLC25A611327216169070 Two-hybrid
VIMSLC25A610679016169070 Two-hybrid
VIMBFSP11071001918147 Reconstituted Complex
VIMBFSP11132721918147 Reconstituted Complex
VIMCASP810729116169070 Two-hybrid
VIMCASP811327216169070 Two-hybrid
VIMCDH510743812003790 Affinity Capture-Western
VIMCDH511327212003790 Affinity Capture-Western
VIMCREB111327216169070 Two-hybrid
VIMCREB110777516169070 Two-hybrid
VIMDCTN110800714600259 Affinity Capture-Western
VIMDCTN111327214600259 Affinity Capture-Western
VIMATN111327216169070 Two-hybrid
VIMATN110815616169070 Two-hybrid
VIMDSP1132729261168 Reconstituted Complex; Two-hybrid
VIMDSP1081669261168 Reconstituted Complex; Two-hybrid
VIMFABP410846516169070 Two-hybrid
VIMFABP411327216169070 Two-hybrid
VIMGFAP11327216189514 Two-hybrid
VIMGFAP10893816189514 Two-hybrid
VIMABLIM111017116189514 Two-hybrid
VIMABLIM111327216189514 Two-hybrid
VIMLMNB111327211441066 Affinity Capture-Western
VIMLMNB111018711441066 Affinity Capture-Western
VIMLOR11019816169070 Two-hybrid
VIMLOR11327216169070 Two-hybrid
VIMMAFG11027216169070 Two-hybrid
VIMMAFG11327216169070 Two-hybrid
VIMMAN2A211029516169070 Two-hybrid
VIMMAN2A211327216169070 Two-hybrid
VIMMEN111038412169273 Affinity Capture-Western; Reconstituted Complex
VIMMEN111327212169273 Affinity Capture-Western; Reconstituted Complex
VIMMGMT11041116226712 Affinity Capture-MS
VIMMGMT11327216226712 Affinity Capture-MS
VIMNFATC211327216169070 Two-hybrid
VIMNFATC211084616169070 Two-hybrid
VIMNME211327211082283 Affinity Capture-Western
VIMNME211089511082283 Affinity Capture-Western
VIMPKP111133410852826 Reconstituted Complex
VIMPKP111327210852826 Reconstituted Complex
VIMPLEC1132723027087 11441066 Affinity Capture-Western; Reconstituted Complex
VIMPLEC1113553027087 11441066 Affinity Capture-Western; Reconstituted Complex
VIMPPL11148812366696 Two-hybrid
VIMPPL11327212366696 Two-hybrid
VIMPKN11115719175763 Biochemical Activity; Two-hybrid
VIMPKN11132729175763 Biochemical Activity; Two-hybrid
VIMPSMA111165516189514 Two-hybrid
VIMPSMA111327216189514 Two-hybrid
VIMPSME111169216169070 Two-hybrid
VIMPSME111327216169070 Two-hybrid
VIMRAD5111182516169070 Two-hybrid
VIMRAD5111327216169070 Two-hybrid
VIMSUMO311249616169070 Two-hybrid
VIMSUMO311327216169070 Two-hybrid
VIMSUMO211327216169070 Two-hybrid
VIMSUMO211249716169070 Two-hybrid
VIMSPTAN111327211441066 Affinity Capture-Western
VIMSPTAN111258711441066 Affinity Capture-Western
VIMSTX1A11267616169070 Two-hybrid
VIMSTX1A11327216169070 Two-hybrid
VIMSYN111271916169070 Two-hybrid
VIMSYN111327216169070 Two-hybrid
VIMTTR11312716169070 Two-hybrid
VIMTTR11327216169070 Two-hybrid
VIMTXN11327212099690 Two-hybrid
VIMTXN11314612099690 Two-hybrid
VIMUPP111327211278417 Affinity Capture-MS; Co-purification
VIMUPP111322411278417 Affinity Capture-MS; Co-purification
YWHAZVIM11336610887173 Affinity Capture-Western; Reconstituted Complex
YWHAZVIM11327210887173 Affinity Capture-Western; Reconstituted Complex
VIMVIM11327211243787 11889032 16169070 Co-crystal Structure; Two-hybrid
UPP2VIM12738711278417 Affinity Capture-MS; Co-purification
UPP2VIM11327211278417 Affinity Capture-MS; Co-purification
OSBP2VIM11726311802775 Co-fractionation
OSBP2VIM11327211802775 Co-fractionation
MICAL1VIM12229011827972 Affinity Capture-Western
MICAL1VIM11327211827972 Affinity Capture-Western
RAB8BVIM11971912639940 Affinity Capture-Western
RAB8BVIM11327212639940 Affinity Capture-Western
SRRM2VIM11707116159877 Affinity Capture-MS
SRRM2VIM11327216159877 Affinity Capture-MS
TRIM28VIM11545716169070 Two-hybrid
TRIM28VIM11327216169070 Two-hybrid
HMG20BVIM11564216169070 Two-hybrid
HMG20BVIM11327216169070 Two-hybrid
RABAC1VIM11581816169070 Two-hybrid
RABAC1VIM11327216169070 Two-hybrid
IVNS1ABPVIM11586916169070 Two-hybrid
IVNS1ABPVIM11327216169070 Two-hybrid
SDCCAG3VIM11602116169070 Two-hybrid
SDCCAG3VIM11327216169070 Two-hybrid
TRIOBPVIM11626116169070 Two-hybrid
TRIOBPVIM11327216169070 Two-hybrid
MYST2VIM11631516169070 16189514 Two-hybrid
MYST2VIM11327216169070 16189514 Two-hybrid
DIS3L2VIM12619916169070 Two-hybrid
DIS3L2VIM11327216169070 Two-hybrid
PUF60VIM11327216169070 Two-hybrid
PUF60VIM11650216169070 Two-hybrid
HABP4VIM11658716169070 Two-hybrid
HABP4VIM11327216169070 Two-hybrid
BRD1VIM11727316169070 Two-hybrid
BRD1VIM11327216169070 Two-hybrid
SERBP1VIM11757116169070 Two-hybrid
SERBP1VIM11327216169070 Two-hybrid
SH3YL1VIM11781116169070 Two-hybrid
SH3YL1VIM11327216169070 Two-hybrid
SLC27A6VIM11327216169070 Two-hybrid
SLC27A6VIM11879016169070 Two-hybrid
SIRT6VIM11960316169070 Two-hybrid
SIRT6VIM11327216169070 Two-hybrid
SRRTVIM11962616169070 Two-hybrid
SRRTVIM11327216169070 Two-hybrid
CRCT1VIM12003116169070 Two-hybrid
CRCT1VIM11327216169070 Two-hybrid
DPPA4VIM12050716169070 Two-hybrid
DPPA4VIM11327216169070 Two-hybrid
C1orf103VIM11327216169070 Two-hybrid
C1orf103VIM12090516169070 Two-hybrid
KIF15VIM12130716169070 Two-hybrid
KIF15VIM11327216169070 Two-hybrid
C7orf36VIM12131716169070 Two-hybrid
C7orf36VIM11327216169070 Two-hybrid
MRPL44VIM12238916169070 Two-hybrid
MRPL44VIM11327216169070 Two-hybrid
XRCC4VIM11335216169070 Two-hybrid
XRCC4VIM11327216169070 Two-hybrid
BHLHE40VIM11412316169070 Two-hybrid
BHLHE40VIM11327216169070 Two-hybrid
TNFRSF14VIM11429816169070 Two-hybrid
TNFRSF14VIM11327216169070 Two-hybrid
FUBP1VIM11439916169070 Two-hybrid
FUBP1VIM11327216169070 Two-hybrid
FAM107AVIM11327216189514 Two-hybrid
FAM107AVIM11634116189514 Two-hybrid
ALS2CR11VIM12735816189514 Two-hybrid
ALS2CR11VIM11327216189514 Two-hybrid
RIBC2VIM11758116189514 Two-hybrid
RIBC2VIM11327216189514 Two-hybrid
TUBGCP4VIM11807816189514 Two-hybrid
TUBGCP4VIM11327216189514 Two-hybrid
APIPVIM11926516189514 Two-hybrid
APIPVIM11327216189514 Two-hybrid
KRT20VIM11327216189514 Two-hybrid
KRT20VIM11997916189514 Two-hybrid
GOPCVIM12138416189514 Two-hybrid
GOPCVIM11327216189514 Two-hybrid
NIF3L1VIM12192216189514 Two-hybrid
NIF3L1VIM11327216189514 Two-hybrid
NOC4LVIM12250816189514 Two-hybrid
NOC4LVIM11327216189514 Two-hybrid
TCHPVIM11327216189514 Two-hybrid
TCHPVIM12398716189514 Two-hybrid
PDLIM1VIM11457216189514 Two-hybrid
PDLIM1VIM11327216189514 Two-hybrid
KIAA0408VIM11327216189514 Two-hybrid
KIAA0408VIM11507816189514 Two-hybrid
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:98932
  • Data Attributes: MGI curated and HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-011212-3'