AutismKB 2.0

Annotation Details for RBM39


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Basic Information Top
Gene Symbol:RBM39 ( CAPER,CAPERalpha,CC1.3,DKFZp781C0423,FLJ44170,HCC1,RNPC2,fSAP59 )
Gene Full Name: RNA binding motif protein 39
Band: 20q11.22
Quick LinksEntrez ID:9584; OMIM: 604739; Uniprot ID:RBM39_HUMAN; ENSEMBL ID: ENSG00000131051; HGNC ID: 15923
Relate to Another Database: SFARIGene; denovo-db
Gene Ontology Top
GO ID Evidence Qualifier GO_term References
GO:0005654IDA-nucleoplasm-
GO:0005815IDA-microtubule organizing center-
GO:0015630IDA-microtubule cytoskeleton-
GO:0016607IDA-nuclear speck-
GO ID Evidence Qualifier GO_term References
GO:0003723IDA-RNA binding22658674
GO:0005515IPI-protein binding15798186
GO ID Evidence Qualifier GO_term References
GO:0006351IEA-transcription, DNA-templated-
GO:0006355IEA-regulation of transcription, DNA-templated-
GO:0006396TAS-RNA processing8227358
GO:0006397IEA-mRNA processing-
GO:0008380IEA-RNA splicing-
Protein-Protein Interaction Top
Gene Symbol Interactant Interaction ID References Description
RBM39CDK911495217643375 Affinity Capture-MS
RBM39CDK910745917643375 Affinity Capture-MS
RBM39ESR111495211704680 Reconstituted Complex; Two-hybrid
RBM39ESR110840311704680 Reconstituted Complex; Two-hybrid
RBM39ESR211495211704680 Reconstituted Complex; Two-hybrid
RBM39ESR210840411704680 Reconstituted Complex; Two-hybrid
RBM39HIST1H1C11495218258596 Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex
RBM39HIST1H1C10926118258596 Affinity Capture-MS; Affinity Capture-Western; Reconstituted Complex
RBM39HNRNPA111495217643375 Affinity Capture-MS
RBM39HNRNPA110942017643375 Affinity Capture-MS
RBM39JUN10992811704680 Reconstituted Complex; Two-hybrid
RBM39JUN11495211704680 Reconstituted Complex; Two-hybrid
SRRM1RBM3911554416159877 Affinity Capture-MS
SRRM1RBM3911495216159877 Affinity Capture-MS
SRRM2RBM3911495216159877 Affinity Capture-MS
SRRM2RBM3911707116159877 Affinity Capture-MS
KHDRBS2RBM3911495217643375 Affinity Capture-MS
KHDRBS2RBM3912843617643375 Affinity Capture-MS
CTNNBL1RBM3912112321385873 Affinity Capture-MS
CTNNBL1RBM3911495221385873 Affinity Capture-MS
No data
No data
AlzGene, PDGene and SZGene Top
Animal Model Top
  • MGI ID: MGI:2157953
  • Data Attributes: MGI curated and HomoloGene calculated
SELECT * FROM lijr_20110218_zfin_genotype_phenotype WHERE ZFIN_Gene_ID='ZDB-GENE-040426-2852'