AutismKB 2.0

Annotation Detail for AGAP2


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Basic Information Top
Gene Symbol:AGAP2 ( CENTG1,FLJ16430,GGAP2,KIAA0167,PIKE )
Gene Full Name: ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
Band: 12q14.1
Quick LinksEntrez ID:116986; OMIM: 605476; Uniprot ID:AGAP2_HUMAN; ENSEMBL ID: ENSG00000135439; HGNC ID: 16921
Relate to Another Database: SFARIGene; denovo-db
Related Pathway Information Top
No data
Pathway IDPathway Name
hsa04144Endocytosis
Pathway IDPathway Name
Axon guidance
Pathway IDPathway Name
200183Trk receptor signaling mediated by PI3K and PLC-gamma
200074Netrin-mediated signaling
No data
Pathway IDPathway Name
500088Netrin-1 signaling
Related Diseases/Disorders Top
Comparative Toxicogenomics Database Top
Chemical ID Chemical Name Interaction Interaction Action Publication
D000643 Ammonium Chloride Ammonium Chloride affects the expression of AGAP2 mRNAaffects expression 16483693
C055494 caffeic acid phenethyl ester [Diethylnitrosamine co-treated with caffeic acid phenethyl ester] results in decreased expression of AGAP2 mRNAaffects cotreatment|decreases expression 20360939
D004052 Diethylnitrosamine [Diethylnitrosamine co-treated with caffeic acid phenethyl ester] results in decreased expression of AGAP2 mRNAaffects cotreatment|decreases expression 20360939
D018038 Sodium Selenite Sodium Selenite results in increased expression of AGAP2 mRNAincreases expression 18175754
Disease ID Disease Name Direct Evidence Inference Chemical Name Inference Score Publication
MESH:D000138 Acidosis Ammonium Chloride 4.1918287403
MESH:D000236 Adenoma Diethylnitrosamine 3.0510737359 6695378
MESH:D018248 Adenoma, Liver Cell Diethylnitrosamine 4.5317162532 19052882 18056438 17620307 16434500 19061943
MESH:D001943 Breast Neoplasms Diethylnitrosamine 2.1917474063
MESH:D006528 Carcinoma, Hepatocellular Diethylnitrosamine 1.8818393292 17173139 16569478 16698587 19052882 18506893 18210153 19539802 18788625 17428255 3084413 20935162 16935385 19335982 20514400 18785209 20214788 17138121 16502159 19822196 16328049 19701751 17761372 16807293 16878318 19171122 20727157 3581430 18056438 20007298 17055752 20084675 18971187 19519916 10737359 21159647 18494052 19394651 10672840 16288022 19919837 16779866 20512989 11831363 19107877 16540662 19208518 17978847 18691550 16830150 19418558 20524982 17162532 20101231 18978308 16681979 18665156 20432363 19383236
MESH:D002471 Cell Transformation, Neoplastic Diethylnitrosamine 3.1221159647 7505956 17174075 2727394
MESH:D018281 Cholangiocarcinoma Diethylnitrosamine 4.0519052882
MESH:D019457 Chromosome Breakage Sodium Selenite 5.3115894690
MESH:D003920 Diabetes Mellitus Sodium Selenite 4.1516285004
MESH:D003924 Diabetes Mellitus, Type 2 Diethylnitrosamine 2.2620387270
MESH:D056486 Drug-Induced Liver Injury Diethylnitrosamine 4.3119107877
MESH:D056486 Drug-Induced Liver Injury Sodium Selenite 4.3115131321
MESH:D004931 Esophageal Achalasia Diethylnitrosamine 5.8416302075
MESH:D005234 Fatty Liver Diethylnitrosamine 3.6120387270 21071580
MESH:D007249 Inflammation Diethylnitrosamine 2.5518785209
MESH:D007333 Insulin Resistance Sodium Selenite 3.5214714311
MESH:D007414 Intestinal Neoplasms caffeic acid phenethyl ester 4.9810783313
MESH:D007674 Kidney Diseases caffeic acid phenethyl ester 3.7515369732
MESH:D015473 Leukemia, Promyelocytic, Acute caffeic acid phenethyl ester 4.2316766008
MESH:D008103 Liver Cirrhosis Diethylnitrosamine 3.0118522880 19638242 18665156 20032147 18407596
MESH:D008107 Liver Diseases Diethylnitrosamine 2.1717034775
MESH:D008113 Liver Neoplasms Diethylnitrosamine 2.352862719 21047994 2422723 20405173 20101389 20492335 19850985 12771043 19551842 19256749 18648771 19073162 15885732 19638242 20434301 20137499 21071580 19499222 19642983 19690152 19090486 12112319 20501860 19255062 18978307 19996281 20118626 19426721 19254457 19833225 15175105 9163691 21167192 16942905 20452335 20583210 18754104 10737359 18977376 19427195 18644402 21278145 19294768 19812893
MESH:D008114 Liver Neoplasms, Experimental Diethylnitrosamine 2.8519126423 18079962 18253720 16267830 3124819 18775883 17942915 18544905 18164116 19539802 18093689 19009564 19519916 19004024 18308698 17174075 2563599 9362446 17854601 21159647 18282651 16842330
MESH:D008175 Lung Neoplasms Diethylnitrosamine 1.7720970405 6695378 21163286 20512841
MESH:D016393 Lymphoma, B-Cell Sodium Selenite 4.5214737004
MESH:D009362 Neoplasm Metastasis Diethylnitrosamine 2.693581430 9029167
MESH:D019636 Neurodegenerative Diseases Diethylnitrosamine 3.6920387270
MESH:D009461 Neurologic Manifestations Diethylnitrosamine 5.8420387270
MESH:D010190 Pancreatic Neoplasms Diethylnitrosamine 2.5316540662
MESH:D011230 Precancerous Conditions Diethylnitrosamine 3.922563599
MESH:D011471 Prostatic Neoplasms Sodium Selenite 3.3318760546
MESH:D013274 Stomach Neoplasms Diethylnitrosamine 1.7618456281
MESH:D013964 Thyroid Neoplasms Diethylnitrosamine 3.297505956
Pathway ID Pathway Name
REACT:18266 Axon guidance
KEGG:04144 Endocytosis
Pharmacogenomics Knowledge Base Top
  • PharmGKB Accession:PA26411
  • No data
    Releated disease ID Related disease Name
    PA443560Breast Neoplasms
    No data
    Drug Bank Top

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    Syndromic Genes

    Non-syndromic Genes

    AutismKB Statistics

    • Studies: 1,036
    • Genes: 1,379
    • CNVs/SVs: 5,420
    • SNVs/Indels: 11,669
    • de novo Mutations: 5,669
    • Mosaics: 789
    • Linkage Regions: 172
    • Paper Collected: 6/30/2018
    • Last Update: 8/26/2018