AutismKB 2.0

Annotation Detail for VPS39


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:VPS39 ( FLJ21681,FLJ46546,KIAA0770,TLP,VAM6,hVam6p )
Gene Full Name: vacuolar protein sorting 39 homolog (S. cerevisiae)
Band: 15q15.1
Quick LinksEntrez ID:23339; OMIM: 612188; Uniprot ID:VPS39_HUMAN; ENSEMBL ID: ENSG00000166887; HGNC ID: 20593
Relate to Another Database: SFARIGene; denovo-db
Related Pathway Information Top
Related Diseases/Disorders Top
Comparative Toxicogenomics Database Top
Chemical ID Chemical Name Interaction Interaction Action Publication
D001104 Arbutin Arbutin results in increased expression of VPS39 mRNAincreases expression 17103032
D007657 Ketone Bodies Ketone Bodies results in increased expression of VPS39 mRNAincreases expression 16807920
D011794 Quercetin Quercetin results in increased expression of VPS39 mRNAincreases expression 17103110
D012643 Selenium [Selenium co-treated with Vitamin E] results in increased expression of VPS39 mRNAaffects cotreatment|increases expression 19244175
D012643 Selenium Selenium results in increased expression of VPS39 mRNAincreases expression 19244175
D014810 Vitamin E [Selenium co-treated with Vitamin E] results in increased expression of VPS39 mRNAaffects cotreatment|increases expression 19244175
D014810 Vitamin E Vitamin E results in increased expression of VPS39 mRNAincreases expression 19244175
Disease ID Disease Name Direct Evidence Inference Chemical Name Inference Score Publication
MESH:D000743 Anemia, Hemolytic Quercetin 4.6117084956
MESH:D001260 Ataxia Telangiectasia Quercetin 5.5215336622
MESH:D001327 Autoimmune Diseases Quercetin 4.8919761891
MESH:D001943 Breast Neoplasms Quercetin 2.6218628248
MESH:D002105 Cadmium Poisoning Quercetin 6.1616962696
MESH:D002252 Carbon Tetrachloride Poisoning Vitamin E 4.4116050911
MESH:D006528 Carcinoma, Hepatocellular Quercetin 2.3019519916 12508355
MESH:D021441 Carcinoma, Pancreatic Ductal Quercetin 5.4417234771
MESH:D006332 Cardiomegaly Quercetin 3.4919794523
MESH:D003092 Colitis Selenium 4.2617936198
MESH:D003110 Colonic Neoplasms Quercetin 2.4619056647 16640504 19440933 17148506 11134977 15741050 17191121
MESH:D015179 Colorectal Neoplasms Quercetin 2.1918852136 18095365
MESH:D019465 Craniofacial Abnormalities Vitamin E 1.9219769572
MESH:D003921 Diabetes Mellitus, Experimental Quercetin 4.0419496084
MESH:D056486 Drug-Induced Liver Injury Selenium 2.2515131321
MESH:C538011 Eales disease Vitamin E 5.329068938
MESH:D005355 Fibrosis Quercetin 4.3819474275
MESH:D005909 Glioblastoma Quercetin 3.6119804834
MESH:D005910 Glioma Quercetin 3.1717643826
MESH:D006330 Heart Defects, Congenital Vitamin E 3.1516080930
MESH:D006333 Heart Failure Selenium 3.2717162251
MESH:D006548 Hernia, Diaphragmatic Vitamin E 2.8016490937 16863852
MESH:D019584 Hot Flashes Vitamin E 4.5814716179
MESH:D006943 Hyperglycemia Quercetin 4.3818262572 11834736
MESH:D006973 Hypertension Quercetin 2.9618356687
MESH:D007251 Influenza, Human Quercetin 22.5716624496
MESH:D007251 Influenza, Human Selenium 22.5716624496
MESH:D007251 Influenza, Human Vitamin E 22.5716624496
MESH:D007627 Keloid Quercetin 5.4417086741
MESH:D007674 Kidney Diseases Quercetin 6.9116962696
MESH:D007674 Kidney Diseases Vitamin E 6.9112488133
MESH:D007676 Kidney Failure, Chronic Selenium 4.2616518626
MESH:D007938 Leukemia Quercetin 3.3117468513
MESH:D008106 Liver Cirrhosis, Experimental Quercetin 2.7712741479
MESH:D008106 Liver Cirrhosis, Experimental Vitamin E 2.7716169303
MESH:D008113 Liver Neoplasms Quercetin 2.7718980244
MESH:D008114 Liver Neoplasms, Experimental Quercetin 3.2619519916
MESH:D008171 Lung Diseases Vitamin E 3.4016863852
MESH:D008175 Lung Neoplasms Quercetin 2.7416280456
MESH:D008175 Lung Neoplasms Vitamin E 2.7411062179
MESH:D008325 Mammary Neoplasms, Experimental Selenium 2.9715318939
MESH:D008654 Mesothelioma Selenium 2.9015107826
MESH:D009203 Myocardial Infarction Quercetin 3.1119595682
MESH:D015428 Myocardial Reperfusion Injury Quercetin 4.0719207477
MESH:D009369 Neoplasms Quercetin 2.9415185748
MESH:D020078 Neurogenic Inflammation Quercetin 4.7717929310
MESH:D015663 Osteoporosis, Postmenopausal Quercetin 4.6219495926
MESH:D010051 Ovarian Neoplasms Quercetin 2.8219005980
MESH:D010190 Pancreatic Neoplasms Quercetin 2.9516965848
MESH:D010954 Plasmacytoma Selenium 5.5015087411
MESH:D011230 Precancerous Conditions Quercetin 4.3119056647
MESH:D011471 Prostatic Neoplasms Quercetin 3.3414715546 17292933
MESH:D011471 Prostatic Neoplasms Vitamin E 3.3415084515
MESH:D012554 Schistosomiasis japonica Quercetin 6.1616862918
MESH:D012871 Skin Diseases Vitamin E 2.5118709164
MESH:D020521 Stroke Vitamin E 3.8116517955
MESH:D001749 Urinary Bladder Neoplasms Quercetin 2.9116720314
No data
Pharmacogenomics Knowledge Base Top
Drug Bank Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018