AutismKB 2.0

Annotation Detail for OCA2


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Basic Information Top
Gene Symbol:OCA2 ( BEY,BEY1,BEY2,BOCA,D15S12,EYCL,EYCL2,EYCL3,HCL3,P,PED,SHEP1 )
Gene Full Name: oculocutaneous albinism II
Band: 15q12-q13.1
Quick LinksEntrez ID:4948; OMIM: 611409; Uniprot ID:P_HUMAN; ENSEMBL ID: ENSG00000104044; HGNC ID: 8101
Relate to Another Database: SFARIGene; denovo-db
Related Pathway Information Top
Pathway IDPathway Name
GLYCLEAV-PWYglycine cleavage complex
No data
No data
No data
No data
No data
Related Diseases/Disorders Top
Desease IDDesease Name
H00168Oculocutaneous albinism
Inherited disorders of amino acid metabolism
Genetic disorders
No data
Desease Name
Blond vs brown hair color
Black vs red hair color
Parkinson's disease (age of onset)
Blue vs brown eyes
NEUROLOGICAL
Black vs blond hair color
Blue vs green eyes
Desease Name
Blue vs. brown eyes
Hair color
Parkinson's disease (age of onset)
Blond vs. brown hair color
Eye color
Black vs. red hair color
Blue vs. green eyes
Black vs. blond hair color
Desease Name
Skin/hair/eye pigmentation 1, blond/brown hair
Albinism, brown oculocutaneous
Skin/hair/eye pigmentation 1, blue/nonblue eyes
Albinism, oculocutaneous, type II
Comparative Toxicogenomics Database Top
Chemical ID Chemical Name Interaction Interaction Action Publication
D005038 Ethylnitrosourea Ethylnitrosourea results in increased mutagenesis of OCA2 geneincreases mutagenesis 17174358
D005047 Etoposide OCA2 protein affects the susceptibility to Etoposideaffects response to substance 16217747
D008770 Methylnitrosourea Methylnitrosourea results in increased mutagenesis of OCA2 geneincreases mutagenesis 10517996
17174358
Disease ID Disease Name Direct Evidence Inference Chemical Name Inference Score Publication
MESH:D000230 Adenocarcinoma Methylnitrosourea 3.2015688392 15113128
MESH:D000236 Adenoma Ethylnitrosourea 3.946695378
MESH:D019046 Bone Marrow Neoplasms Etoposide 6.0314601052
MESH:D001927 Brain Diseases Ethylnitrosourea 5.3314991843
MESH:D001932 Brain Neoplasms Ethylnitrosourea 4.7415144691 16357521 18412241 16436596 16651633
MESH:D001943 Breast Neoplasms Etoposide 2.7816322251
MESH:D001943 Breast Neoplasms Methylnitrosourea 2.7816253758 11306469 14633655
MESH:D002386 Cataract Methylnitrosourea 4.2212484553
MESH:D002471 Cell Transformation, Neoplastic Ethylnitrosourea 8.3816003739
MESH:D002471 Cell Transformation, Neoplastic Methylnitrosourea 8.387505956 2727394
MESH:D016543 Central Nervous System Neoplasms Ethylnitrosourea 6.8517160924
MESH:D004476 Ectodermal Dysplasia Ethylnitrosourea 6.8518357618
MESH:D005354 Fibrosarcoma Methylnitrosourea 5.9711555667
MESH:D005909 Glioblastoma Ethylnitrosourea 4.1016436596
MESH:D005910 Glioma Ethylnitrosourea 7.0716357521 16651633 18412241
MESH:D005910 Glioma Methylnitrosourea 7.079825942
MESH:D006561 Herpes Simplex Etoposide 5.3010809021
MESH:D006689 Hodgkin Disease Etoposide 4.2815147373 18180244 17606976 16200630 16135485
MESH:D007248 Infertility, Male Methylnitrosourea 4.077193160
MESH:D007680 Kidney Neoplasms Ethylnitrosourea 4.3217379185
MESH:D017880 Limb Deformities, Congenital Methylnitrosourea 4.5115526292
MESH:D038061 Lower Extremity Deformities, Congenital Methylnitrosourea 6.1216080182
MESH:D008175 Lung Neoplasms Ethylnitrosourea 3.2116271038 6695378 17703301 16019985
MESH:D008175 Lung Neoplasms Methylnitrosourea 3.2118062963
MESH:D008223 Lymphoma Ethylnitrosourea 14.6915790496
MESH:D008223 Lymphoma Etoposide 14.6912556972 12854902
MESH:D008223 Lymphoma Methylnitrosourea 14.6911418001 16257854
MESH:D016393 Lymphoma, B-Cell Methylnitrosourea 5.3014633661
MESH:D016399 Lymphoma, T-Cell Ethylnitrosourea 5.7015375218
MESH:D008325 Mammary Neoplasms, Experimental Ethylnitrosourea 7.5618041768 10767621 10838139
MESH:D008325 Mammary Neoplasms, Experimental Methylnitrosourea 7.5610767621 19196723 17131329 16051031 11807958 16827153 11751437 14633655 10838139 14999141 12931682 16944150 15113128 15688392 17020996 16619500 15313902
MESH:D008579 Meningioma Ethylnitrosourea 6.8517943659
MESH:D009369 Neoplasms Methylnitrosourea 3.4815533788
MESH:D009374 Neoplasms, Experimental Ethylnitrosourea 11.9416707424
MESH:D009374 Neoplasms, Experimental Methylnitrosourea 11.9412696579
MESH:D009442 Neurilemmoma Ethylnitrosourea 15.9016003739 16651423 17160924
MESH:D009442 Neurilemmoma Methylnitrosourea 15.9011555667
MESH:C537730 Oculocutaneous albinism type 2 marker/mechanism
MESH:D009837 Oligodendroglioma Ethylnitrosourea 6.8517160924
MESH:D010190 Pancreatic Neoplasms Etoposide 6.3119003803
MESH:D010190 Pancreatic Neoplasms Methylnitrosourea 6.3116965848
MESH:D011471 Prostatic Neoplasms Etoposide 3.7817172428
MESH:D011471 Prostatic Neoplasms Methylnitrosourea 3.7812376480 15682402
MESH:D012162 Retinal Degeneration Methylnitrosourea 4.7418172121 18155124
MESH:D012175 Retinoblastoma Methylnitrosourea 6.2311555667
MESH:D012512 Sarcoma, Ewing's Etoposide 5.2914601052
MESH:D013274 Stomach Neoplasms Methylnitrosourea 2.7016257854 18593901 15930296
MESH:D013953 Thymus Neoplasms Ethylnitrosourea 14.9215790496
MESH:D013953 Thymus Neoplasms Methylnitrosourea 14.9211418001
MESH:D013964 Thyroid Neoplasms Methylnitrosourea 4.267505956 3078959
No data
Pharmacogenomics Knowledge Base Top
  • PharmGKB Accession:PA31890
  • No data
    Releated disease ID Related disease Name
    PA444903Melanoma
    PA445683Skin Neoplasms
    No data
    Drug Bank Top

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    Syndromic Genes

    Non-syndromic Genes

    AutismKB Statistics

    • Studies: 1,036
    • Genes: 1,379
    • CNVs/SVs: 5,420
    • SNVs/Indels: 11,669
    • de novo Mutations: 5,669
    • Mosaics: 789
    • Linkage Regions: 172
    • Paper Collected: 6/30/2018
    • Last Update: 8/26/2018