AutismKB 2.0

Annotation Detail for SYNGAP1


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Basic Information Top
Gene Symbol:SYNGAP1 ( DKFZp761G1421,KIAA1938,MRD5,RASA1,RASA5,SYNGAP )
Gene Full Name: synaptic Ras GTPase activating protein 1
Band: 6p21.32
Quick LinksEntrez ID:8831; OMIM: 603384; Uniprot ID:SYGP1_HUMAN; ENSEMBL ID: ENSG00000197283; HGNC ID: 11497
Relate to Another Database: SFARIGene; denovo-db
Related Pathway Information Top
Related Diseases/Disorders Top
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Desease Name
Mental retardation, autosomal dominant 5
Comparative Toxicogenomics Database Top
Chemical ID Chemical Name Interaction Interaction Action Publication
D000643 Ammonium Chloride Ammonium Chloride affects the expression of SYNGAP1 mRNAaffects expression 16483693
D004997 Ethinyl Estradiol Ethinyl Estradiol results in increased expression of SYNGAP1 mRNAincreases expression 17942748
Disease ID Disease Name Direct Evidence Inference Chemical Name Inference Score Publication
MESH:D000138 Acidosis Ammonium Chloride 4.4418287403
MESH:D000152 Acne Vulgaris Ethinyl Estradiol 5.0117505938
MESH:D000230 Adenocarcinoma Ethinyl Estradiol 1.9014692618
MESH:D001161 Arteriosclerosis Ethinyl Estradiol 4.2311256880
MESH:D001169 Arthritis, Experimental Ethinyl Estradiol 2.9315885639
MESH:D001321 Autistic Disorder marker/mechanism 20531469
MESH:D002779 Cholestasis Ethinyl Estradiol 3.2417110522 17333356 17681005 15861022 16105132 16919318 11677210
MESH:D004681 Encephalomyelitis, Autoimmune, Experimental Ethinyl Estradiol 3.8612538720
MESH:D005234 Fatty Liver Ethinyl Estradiol 3.3615345470
MESH:D007021 Hypospadias Ethinyl Estradiol 4.5716569931 16945680
MESH:D007247 Infertility, Female Ethinyl Estradiol 4.0712013081
MESH:D007248 Infertility, Male Ethinyl Estradiol 2.7917937319
MESH:D008607 Mental Retardation marker/mechanism 21076407
OMIM:612621 MENTAL RETARDATION, AUTOSOMAL DOMINANT 5 marker/mechanism
MESH:D016584 Panic Disorder Ethinyl Estradiol 4.2911578682
MESH:D011537 Pruritus Ethinyl Estradiol 4.2015861022 16919318
MESH:D013088 Spermatocele Ethinyl Estradiol 5.0116709447
MESH:D019851 Thrombophilia Ethinyl Estradiol 4.2311994571
MESH:D013927 Thrombosis Ethinyl Estradiol 3.6215669648
MESH:D014594 Uterine Neoplasms Ethinyl Estradiol 3.9714692618
MESH:D020246 Venous Thrombosis Ethinyl Estradiol 4.0915869587 14671159
No data
Pharmacogenomics Knowledge Base Top
  • PharmGKB Accession:PA36279
  • No data
    Releated disease ID Related disease Name
    PA153906318Autism Spectrum Disorder
    No data
    Drug Bank Top

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    Syndromic Genes

    Non-syndromic Genes

    AutismKB Statistics

    • Studies: 1,036
    • Genes: 1,379
    • CNVs/SVs: 5,420
    • SNVs/Indels: 11,669
    • de novo Mutations: 5,669
    • Mosaics: 789
    • Linkage Regions: 172
    • Paper Collected: 6/30/2018
    • Last Update: 8/26/2018