Annotation Detail for KCNE3
Basic Information Top
| Gene Symbol: | KCNE3 ( DKFZp781H21101,HOKPP,HYPP,MGC102685,MGC129924,MiRP2 ) |
|---|---|
| Gene Full Name: | potassium voltage-gated channel, Isk-related family, member 3 |
| Band: | 11q13.4 |
| Quick Links | Entrez ID:10008; OMIM: 604433; Uniprot ID:KCNE3_HUMAN; ENSEMBL ID: ENSG00000175538; HGNC ID: 6243 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.523899
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 4 / 564012 | 7 |  |
| neonate | 2 / 31097 | 64 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 5 / 55556 | 89 | |
| adult | 38 / 1939121 | 19 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 8 / 119369 | 67 | |
| germ cell tumor | 11 / 263845 | 41 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 57 / 3360307 | 16 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 0 / 29757 | 0 | |
| blood | 7 / 123478 | 56 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 8 / 1100989 | 7 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 0 / 89626 | 0 | |
| intestine | 12 / 234472 | 51 | |
| kidney | 9 / 211777 | 42 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 7 / 336974 | 20 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 14 / 96619 | 144 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_14169_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 1.86 ± 0.97 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.19 ± 0.22 | |
| Basal Part of Pons | 1.17 ± 0.45 | |
| Cerebellar Cortex | 1.13 ± 0.51 | |
| Cerebellar Nuclei | 1.67 ± 0.65 | |
| Claustrum | 2.21 ± 0.8 | |
| Epithalamus | 1.44 ± 0.76 | |
| Frontal Lobe | 1.4 ± 0.75 | |
| Globus Pallidus | 2.32 ± 0.79 | |
| Hypothalamus | 1.41 ± 0.75 | |
| Insula | 1.19 ± 0.63 | |
| Limbic Lobe | 1.48 ± 0.67 | |
| Mesencephalon | 1.6 ± 0.79 | |
| Myelencephalon | 1.48 ± 0.66 | |
| Occipital Lobe | 1.63 ± 0.78 | |
| Parietal Lobe | 1.37 ± 0.75 | |
| Pontine Tegmentum | 1.55 ± 0.73 | |
| Striatum | 1.7 ± 0.61 | |
| Subthalamus | 1.65 ± 0.41 | |
| Temporal Lobe | 1.41 ± 0.69 | |
| Thalamus | 1.42 ± 0.67 | |
| White Matter | 2.05 ± 0.57 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Kcne3 | CB | Cerebellum | 5.59 | |
| 4.89 | | |||
| Kcne3 | CTX | Cerebral cortex | 4.3 | |
| 2.95 | | |||
| Kcne3 | HIP | Hippocampal region | 10.89 | |
| 4.41 | | |||
| Kcne3 | HPF | Hippocampal formation | 9.08 | |
| 4.96 | | |||
| Kcne3 | HY | Hypothalamus | 1.29 | |
| 0.8 | | |||
| Kcne3 | LSX | Lateral septal complex | 2.18 | |
| 2.8 | | |||
| Kcne3 | MB | Midbrain | 1.93 | |
| 1.53 | | |||
| Kcne3 | MY | Medulla | 2.89 | |
| 3.17 | | |||
| Kcne3 | OLF | Olfactory bulb | 6.47 | |
| 3.45 | | |||
| Kcne3 | P | Pons | 3.69 | |
| 3.09 | | |||
| Kcne3 | PAL | Pallidum | 0.29 | |
| 0.23 | | |||
| Kcne3 | RHP | Retrohippocampal region | 6.14 | |
| 5.04 | | |||
| Kcne3 | sAMY | Striatum-like amygdalar nuclei | 2.25 | |
| 1.33 | | |||
| Kcne3 | STR | Striatum | 0.99 | |
| 0.68 | | |||
| Kcne3 | STRd | Striatum dorsal region | 0.17 | |
| 0.11 | | |||
| Kcne3 | STRv | Striatum ventral region | 3.08 | |
| 1.73 | | |||
| Kcne3 | TH | Thalamus | 1.42 | |
| 0.83 | |