AutismKB 2.0

Annotation Detail for POM121C


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:POM121C ( DKFZp586P2220,DKFZp779K1713,FLJ43877,FLJ45082,MGC163459,MGC163461,POM121-2 )
Gene Full Name: POM121 membrane glycoprotein C
Band: 7q11.23
Quick LinksEntrez ID:100101267; OMIM: NA; Uniprot ID:P121C_HUMAN; ENSEMBL ID: ENSG00000135213; HGNC ID: 34005
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body7 / 7076198
blastocyst4 / 6231964
fetus40 / 56401270
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult146 / 193912175
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor7 / 9417874
cervical tumor3 / 3436687
chondrosarcoma11 / 82823132
colorectal tumor7 / 11424661
esophageal tumor0 / 172900 
gastrointestinal tumor21 / 119369175
germ cell tumor29 / 263845109
glioma11 / 106883102
head and neck tumor14 / 136302102
kidney tumor9 / 68959130
leukemia10 / 95842104
liver tumor4 / 9635941
lung tumor9 / 10312787
lymphoma3 / 7175541
non-neoplasia1 / 9725010
normal169 / 336030750
ovarian tumor0 / 766820 
pancreatic tumor20 / 104616191
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer5 / 10268048
retinoblastoma4 / 4635686
skin tumor9 / 12494972
soft tissue/muscle tissue tumor11 / 12519187
uterine tumor10 / 90257110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites4 / 4001599
bladder1 / 2975733
blood11 / 12347889
bone3 / 7165541
bone marrow2 / 4880140
brain51 / 110098946
cervix3 / 4817162
connective tissue9 / 14925560
ear0 / 162120 
embryonic tissue14 / 21572264
esophagus0 / 202090 
eye21 / 21105499
heart6 / 8962666
intestine20 / 23447285
kidney17 / 21177780
larynx1 / 2414541
liver5 / 20774324
lung21 / 33697462
lymph2 / 4427045
lymph node7 / 9161076
mammary gland12 / 15327178
mouth7 / 67052104
muscle5 / 10771546
nerve0 / 157680 
ovary1 / 1020519
pancreas24 / 214812111
parathyroid0 / 205390 
pharynx8 / 41328193
pituitary gland2 / 16585120
placenta18 / 28082564
prostate6 / 18934531
salivary gland0 / 201550 
skin14 / 21057466
spleen1 / 5395218
stomach16 / 96619165
testis29 / 33044287
thymus6 / 8113173
thyroid2 / 4747342
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus21 / 23287890
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213360_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts1169.9
Adipocyte424.45
AdrenalCortex468.6
Adrenalgland465.45
Amygdala602.15
Appendix184.15
AtrioventricularNode151.9
BDCA4+_DentriticCells506.25
Bonemarrow687.8
BronchialEpithelialCells490.9
CD105+_Endothelial617.15
CD14+_Monocytes533.75
CD19+_BCells(neg._sel.)654.4
CD33+_Myeloid763.9
CD34+879.8
CD4+_Tcells654.8
CD56+_NKCells855.3
CD71+_EarlyErythroid369.2
CD8+_Tcells645.6
CardiacMyocytes253.75
Caudatenucleus577.55
Cerebellum610.4
CerebellumPeduncles830.8
CiliaryGanglion136.2
CingulateCortex761.25
Colorectaladenocarcinoma892.65
DorsalRootGanglion116.15
FetalThyroid933.05
Fetalbrain828.3
Fetalliver370.7
Fetallung477.15
GlobusPallidus339.05
Heart379.8
Hypothalamus731.85
Kidney364.95
Leukemia_chronicMyelogenousK-5621006.1
Leukemia_promyelocytic-HL-60668.3
Leukemialymphoblastic(MOLT-4)1285.45
Liver415.2
Lung506.95
Lymphnode801.3
Lymphoma_burkitts(Daudi)1300.4
Lymphoma_burkitts(Raji)997.45
MedullaOblongata550.9
OccipitalLobe576.1
OlfactoryBulb383.6
Ovary255.45
Pancreas317.65
PancreaticIslet636.7
ParietalLobe544.3
Pituitary621.6
Placenta818.75
Pons549.35
PrefrontalCortex763.9
Prostate468.1
Salivarygland295.15
SkeletalMuscle285.45
Skin167.6
SmoothMuscle441.9
Spinalcord554.6
SubthalamicNucleus468.3
SuperiorCervicalGanglion216.7
TemporalLobe442
Testis781.05
TestisGermCell674.85
TestisIntersitial422.85
TestisLeydigCell419.4
TestisSeminiferousTubule740.45
Thalamus603.8
Thymus724.45
Thyroid547
Tongue274.85
Tonsil824.3
Trachea388.4
TrigeminalGanglion351.35
Uterus375.1
UterusCorpus347.4
WholeBlood528.65
Wholebrain454.8
colon222.2
pineal_day1526.58
pineal_night1377.86
retina696.375
small_intestine291.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_655_PI417507815
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.24 ± 1.26
Basal Forebrain5.08 ± 0.24
Basal Part of Pons4.67 ± 1.29
Cerebellar Cortex5 ± 0.67
Cerebellar Nuclei5.52 ± 1.15
Claustrum6.13 ± 1.31
Epithalamus4.53 ± 0.6
Frontal Lobe4.79 ± 0.75
Globus Pallidus5.32 ± 0.48
Hypothalamus4.9 ± 0.36
Insula4.99 ± 0.75
Limbic Lobe5.07 ± 1.01
Mesencephalon5.12 ± 0.92
Myelencephalon5.2 ± 0.92
Occipital Lobe4.98 ± 1.08
Parietal Lobe5.08 ± 0.95
Pontine Tegmentum5.2 ± 0.63
Striatum4.92 ± 0.83
Subthalamus4.92 ± 0.91
Temporal Lobe4.86 ± 0.78
Thalamus5.11 ± 0.91
White Matter4.94 ± 0.68
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00504857 24 655 678 APPTLQAETATKPQATSAPSPAPK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved