Annotation Detail for PDCD7
Basic Information Top
| Gene Symbol: | PDCD7 ( ES18,HES18,MGC22015 ) |
|---|---|
| Gene Full Name: | programmed cell death 7 |
| Band: | 15q22.31 |
| Quick Links | Entrez ID:10081; OMIM: 608138; Uniprot ID:PDCD7_HUMAN; ENSEMBL ID: ENSG00000090470; HGNC ID: 8767 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.458596
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 17 / 564012 | 30 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 36 / 1939121 | 18 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 9 / 95842 | 93 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 60 / 3360307 | 17 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 7 / 124949 | 56 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 3 / 29757 | 100 | |
| blood | 3 / 123478 | 24 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 13 / 1100989 | 11 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 3 / 89626 | 33 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 3 / 24145 | 124 | |
| liver | 1 / 207743 | 4 | |
| lung | 7 / 336974 | 20 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 9 / 153271 | 58 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 9 / 102051 | 88 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 3 / 16585 | 180 | |
| placenta | 8 / 280825 | 28 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 7 / 210574 | 33 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
- Probe name: A_24_P159181
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 10.66 ± 0.26 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.72 ± 0.22 | |
| Basal Part of Pons | 10.57 ± 0.17 | |
| Cerebellar Cortex | 10.9 ± 0.13 | |
| Cerebellar Nuclei | 10.45 ± 0.25 | |
| Claustrum | 10.58 ± 0.26 | |
| Epithalamus | 10.49 ± 0.24 | |
| Frontal Lobe | 10.54 ± 0.25 | |
| Globus Pallidus | 10.63 ± 0.14 | |
| Hypothalamus | 10.54 ± 0.35 | |
| Insula | 10.62 ± 0.18 | |
| Limbic Lobe | 10.69 ± 0.31 | |
| Mesencephalon | 10.67 ± 0.33 | |
| Myelencephalon | 10.63 ± 0.27 | |
| Occipital Lobe | 10.97 ± 0.3 | |
| Parietal Lobe | 10.74 ± 0.24 | |
| Pontine Tegmentum | 10.54 ± 0.27 | |
| Striatum | 10.41 ± 0.27 | |
| Subthalamus | 10.67 ± 0.2 | |
| Temporal Lobe | 10.65 ± 0.24 | |
| Thalamus | 10.51 ± 0.2 | |
| White Matter | 11.49 ± 0.1 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00010595 | 19 | 336 | 354 | KGVCPPASADETFTHHLQR | Peptide Atlas |
| PDCD7_HUMAN_261 | 10 | 261 | 270 | EAEAARAVER | PRIDE |