Annotation Detail for RBM12
Basic Information Top
| Gene Symbol: | RBM12 ( HRIHFB2091,KIAA0765,SWAN ) |
|---|---|
| Gene Full Name: | RNA binding motif protein 12 |
| Band: | 20q11.22 |
| Quick Links | Entrez ID:10137; OMIM: 607179; Uniprot ID:RBM12_HUMAN; ENSEMBL ID: ENSG00000214078,ENSG00000244462; HGNC ID: 9898 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 212170_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 13.65 |  |
| Adipocyte | 5.85 |  |
| AdrenalCortex | 7.15 | |
| Adrenalgland | 5.2 | |
| Amygdala | 6.35 | |
| Appendix | 6.1 | |
| AtrioventricularNode | 4.95 | |
| BDCA4+_DentriticCells | 6.7 | |
| Bonemarrow | 5.9 | |
| BronchialEpithelialCells | 5.8 | |
| CD105+_Endothelial | 7.4 | |
| CD14+_Monocytes | 6.45 | |
| CD19+_BCells(neg._sel.) | 9.75 | |
| CD33+_Myeloid | 8.15 | |
| CD34+ | 27.8 | |
| CD4+_Tcells | 7.4 | |
| CD56+_NKCells | 7.9 | |
| CD71+_EarlyErythroid | 6.45 | |
| CD8+_Tcells | 9.1 | |
| CardiacMyocytes | 8.35 | |
| Caudatenucleus | 5.4 | |
| Cerebellum | 4.8 | |
| CerebellumPeduncles | 6.95 | |
| CiliaryGanglion | 4.65 | |
| CingulateCortex | 6.35 | |
| Colorectaladenocarcinoma | 6.05 | |
| DorsalRootGanglion | 4.85 | |
| FetalThyroid | 6 | |
| Fetalbrain | 8.75 | |
| Fetalliver | 5.15 | |
| Fetallung | 5.1 | |
| GlobusPallidus | 4.45 | |
| Heart | 8.25 | |
| Hypothalamus | 6.7 | |
| Kidney | 4.9 | |
| Leukemia_chronicMyelogenousK-562 | 5.5 | |
| Leukemia_promyelocytic-HL-60 | 8.15 | |
| Leukemialymphoblastic(MOLT-4) | 5.95 | |
| Liver | 8.15 | |
| Lung | 6.1 | |
| Lymphnode | 5.35 | |
| Lymphoma_burkitts(Daudi) | 8.55 | |
| Lymphoma_burkitts(Raji) | 8.55 | |
| MedullaOblongata | 5.4 | |
| OccipitalLobe | 5.85 | |
| OlfactoryBulb | 4.8 | |
| Ovary | 4.15 | |
| Pancreas | 4.8 | |
| PancreaticIslet | 6.3 | |
| ParietalLobe | 6.3 | |
| Pituitary | 7.15 | |
| Placenta | 6.05 | |
| Pons | 5.7 | |
| PrefrontalCortex | 8.3 | |
| Prostate | 6.7 | |
| Salivarygland | 4.85 | |
| SkeletalMuscle | 7.55 | |
| Skin | 4.85 | |
| SmoothMuscle | 6.95 | |
| Spinalcord | 6.45 | |
| SubthalamicNucleus | 5.5 | |
| SuperiorCervicalGanglion | 7.2 | |
| TemporalLobe | 5.5 | |
| Testis | 4.7 | |
| TestisGermCell | 4.95 | |
| TestisIntersitial | 5.05 | |
| TestisLeydigCell | 5.95 | |
| TestisSeminiferousTubule | 5.25 | |
| Thalamus | 6.2 | |
| Thymus | 4.45 | |
| Thyroid | 7.75 | |
| Tongue | 6 | |
| Tonsil | 5.75 | |
| Trachea | 5.05 | |
| TrigeminalGanglion | 6.2 | |
| Uterus | 5.25 | |
| UterusCorpus | 5.35 | |
| WholeBlood | 8.05 | |
| Wholebrain | 4.95 | |
| colon | 6.1 | |
| pineal_day | 21.48 | |
| pineal_night | 28.46 | |
| retina | 10.925 | |
| small_intestine | 5.75 | |
- Probe name: CUST_9165_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.54 ± 0.22 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.55 ± 0.16 | |
| Basal Part of Pons | 7.46 ± 0.36 | |
| Cerebellar Cortex | 7.73 ± 0.15 | |
| Cerebellar Nuclei | 7.26 ± 0.23 | |
| Claustrum | 7.64 ± 0.45 | |
| Epithalamus | 7.34 ± 0.31 | |
| Frontal Lobe | 7.29 ± 0.28 | |
| Globus Pallidus | 7.45 ± 0.26 | |
| Hypothalamus | 7.36 ± 0.29 | |
| Insula | 7.32 ± 0.31 | |
| Limbic Lobe | 7.46 ± 0.33 | |
| Mesencephalon | 7.39 ± 0.25 | |
| Myelencephalon | 7.39 ± 0.26 | |
| Occipital Lobe | 7.56 ± 0.3 | |
| Parietal Lobe | 7.45 ± 0.3 | |
| Pontine Tegmentum | 7.38 ± 0.34 | |
| Striatum | 7.31 ± 0.33 | |
| Subthalamus | 7.46 ± 0.38 | |
| Temporal Lobe | 7.4 ± 0.24 | |
| Thalamus | 7.31 ± 0.26 | |
| White Matter | 8.03 ± 0.26 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Rbm12 | CB | Cerebellum | 29.38 |  |
| 38.04 | | |||
| Rbm12 | CTX | Cerebral cortex | 88.81 | |
| 69.17 | | |||
| Rbm12 | HIP | Hippocampal region | 57.35 | |
| 97.75 | | |||
| Rbm12 | HPF | Hippocampal formation | 60.3 | |
| 83.28 | | |||
| Rbm12 | HY | Hypothalamus | 57.57 | |
| 45.96 | | |||
| Rbm12 | LSX | Lateral septal complex | 46.16 | |
| 33.86 | | |||
| Rbm12 | MB | Midbrain | 37.85 | |
| 36.43 | | |||
| Rbm12 | MY | Medulla | 39.36 | |
| 43.38 | | |||
| Rbm12 | OLF | Olfactory bulb | 72 | |
| 62.63 | | |||
| Rbm12 | P | Pons | 38.11 | |
| 42.67 | | |||
| Rbm12 | PAL | Pallidum | 69 | |
| 59.12 | | |||
| Rbm12 | RHP | Retrohippocampal region | 66.71 | |
| 63.67 | | |||
| Rbm12 | sAMY | Striatum-like amygdalar nuclei | 46.76 | |
| 33.66 | | |||
| Rbm12 | STR | Striatum | 67.1 | |
| 50.45 | | |||
| Rbm12 | STRd | Striatum dorsal region | 67.92 | |
| 52.02 | | |||
| Rbm12 | STRv | Striatum ventral region | 88.14 | |
| 62.49 | | |||
| Rbm12 | TH | Thalamus | 58.83 | |
| 49.03 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00008135 | 14 | 544 | 557 | VCAHITNIPFSITK | Peptide Atlas |
| RBM12_HUMAN_105 | 12 | 105 | 116 | SGPPPSSGMSSR | PRIDE |
| RBM12_HUMAN_7 | 14 | 7 | 20 | LQGLPIVAGTMDIR | PRIDE |
| RBM12_HUMAN_79 | 9 | 79 | 87 | MQNMIELSR | PRIDE |