AutismKB 2.0

Annotation Detail for RASA4


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Basic Information Top
Gene Symbol:RASA4 ( CAPRI,FLJ59070,GAPL,KIAA0538,MGC131890,RASA4B )
Gene Full Name: RAS p21 protein activator 4
Band: 7q22.1
Quick LinksEntrez ID:10156; OMIM: 607943; Uniprot ID:RASL2_HUMAN; ENSEMBL ID: ENSG00000105808; HGNC ID: 23181
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus3 / 5640125
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult6 / 19391213
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal18 / 33603075
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain11 / 11009899
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine1 / 2344724
kidney2 / 2117779
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate1 / 1893455
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus2 / 2328788
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212707_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.95
Adipocyte8.25
AdrenalCortex12.4
Adrenalgland7.7
Amygdala13.75
Appendix9.15
AtrioventricularNode7.2
BDCA4+_DentriticCells10.6
Bonemarrow8.65
BronchialEpithelialCells8.1
CD105+_Endothelial8.35
CD14+_Monocytes13.25
CD19+_BCells(neg._sel.)8.95
CD33+_Myeloid11.3
CD34+10
CD4+_Tcells9.35
CD56+_NKCells9.2
CD71+_EarlyErythroid7.7
CD8+_Tcells8.75
CardiacMyocytes11.8
Caudatenucleus7.8
Cerebellum7.5
CerebellumPeduncles11.55
CiliaryGanglion7.15
CingulateCortex15.55
Colorectaladenocarcinoma8.65
DorsalRootGanglion7.05
FetalThyroid10.95
Fetalbrain9.8
Fetalliver7.55
Fetallung6.7
GlobusPallidus6.95
Heart11.95
Hypothalamus9.8
Kidney7.5
Leukemia_chronicMyelogenousK-5627.75
Leukemia_promyelocytic-HL-607.45
Leukemialymphoblastic(MOLT-4)6.6
Liver11.1
Lung21.05
Lymphnode7.45
Lymphoma_burkitts(Daudi)13.55
Lymphoma_burkitts(Raji)17.7
MedullaOblongata7.75
OccipitalLobe7.55
OlfactoryBulb6.9
Ovary6.55
Pancreas7.25
PancreaticIslet12.35
ParietalLobe9.4
Pituitary12.35
Placenta8.35
Pons8.2
PrefrontalCortex11.5
Prostate10.2
Salivarygland7.6
SkeletalMuscle39.45
Skin7.95
SmoothMuscle9.85
Spinalcord11.05
SubthalamicNucleus11.1
SuperiorCervicalGanglion10.65
TemporalLobe7.95
Testis7.15
TestisGermCell6.9
TestisIntersitial7.5
TestisLeydigCell8.4
TestisSeminiferousTubule7.7
Thalamus10.8
Thymus6.6
Thyroid16.6
Tongue10.75
Tonsil8.2
Trachea7.2
TrigeminalGanglion9.2
Uterus8.75
UterusCorpus8.5
WholeBlood9.15
Wholebrain9.85
colon8.2
pineal_day11.62
pineal_night10.38
retina10.375
small_intestine7.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rasa4CBCerebellum10.31
10
Rasa4CTXCerebral cortex0.98
1.27
Rasa4HIPHippocampal region0.51
0.74
Rasa4HPFHippocampal formation0.58
0.75
Rasa4HYHypothalamus1.17
0.86
Rasa4LSXLateral septal complex0.89
0.56
Rasa4MBMidbrain1.24
1.28
Rasa4MYMedulla1.98
1.86
Rasa4OLFOlfactory bulb13.34
10.84
Rasa4PPons2.12
2.09
Rasa4PALPallidum0.99
0.73
Rasa4RHPRetrohippocampal region0.66
0.74
Rasa4sAMYStriatum-like amygdalar nuclei0.36
0.25
Rasa4STRStriatum0.35
0.29
Rasa4STRdStriatum dorsal region0.28
0.26
Rasa4STRvStriatum ventral region0.29
0.25
Rasa4THThalamus3.11
2.14
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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