AutismKB 2.0

Annotation Detail for ZNF197


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Basic Information Top
Gene Symbol:ZNF197 ( D3S1363E,P18,VHLaK,ZKSCAN9,ZNF166,ZNF20 )
Gene Full Name: zinc finger protein 197
Band: 3p21.31
Quick LinksEntrez ID:10168; OMIM: NA; Uniprot ID:ZN197_HUMAN; ENSEMBL ID: ENSG00000186448; HGNC ID: 12988
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst1 / 6231916
fetus15 / 56401226
neonate1 / 3109732
infant0 / 236200 
juvenile0 / 555560 
adult44 / 193912122
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma3 / 8282336
colorectal tumor6 / 11424652
esophageal tumor1 / 1729057
gastrointestinal tumor0 / 1193690 
germ cell tumor5 / 26384518
glioma0 / 1068830 
head and neck tumor3 / 13630222
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal57 / 336030716
ovarian tumor4 / 7668252
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor3 / 12494924
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow1 / 4880120
brain17 / 110098915
cervix2 / 4817141
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus1 / 2020949
eye2 / 2110549
heart0 / 896260 
intestine7 / 23447229
kidney6 / 21177728
larynx0 / 241450 
liver1 / 2077434
lung8 / 33697423
lymph0 / 442700 
lymph node3 / 9161032
mammary gland5 / 15327132
mouth2 / 6705229
muscle2 / 10771518
nerve0 / 157680 
ovary4 / 10205139
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta3 / 28082510
prostate1 / 1893455
salivary gland0 / 201550 
skin5 / 21057423
spleen1 / 5395218
stomach0 / 966190 
testis7 / 33044221
thymus3 / 8113136
thyroid3 / 4747363
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus5 / 23287821
vascular7 / 51780135
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205855_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.95
Adipocyte7.8
AdrenalCortex10.8
Adrenalgland7.6
Amygdala7.95
Appendix39.85
AtrioventricularNode13.75
BDCA4+_DentriticCells7.65
Bonemarrow9.9
BronchialEpithelialCells7.6
CD105+_Endothelial8.15
CD14+_Monocytes8.45
CD19+_BCells(neg._sel.)8
CD33+_Myeloid8.75
CD34+12.75
CD4+_Tcells7.85
CD56+_NKCells8.25
CD71+_EarlyErythroid7.7
CD8+_Tcells6.65
CardiacMyocytes14.65
Caudatenucleus7.4
Cerebellum7.65
CerebellumPeduncles11.05
CiliaryGanglion14.35
CingulateCortex8
Colorectaladenocarcinoma8.05
DorsalRootGanglion8.1
FetalThyroid12.45
Fetalbrain7.75
Fetalliver8.75
Fetallung6.65
GlobusPallidus6.3
Heart21.85
Hypothalamus8.6
Kidney7.15
Leukemia_chronicMyelogenousK-5627.25
Leukemia_promyelocytic-HL-607.2
Leukemialymphoblastic(MOLT-4)5.7
Liver13.6
Lung9.15
Lymphnode7.25
Lymphoma_burkitts(Daudi)11.2
Lymphoma_burkitts(Raji)15.6
MedullaOblongata9.65
OccipitalLobe7.45
OlfactoryBulb7.15
Ovary9
Pancreas6.95
PancreaticIslet11.5
ParietalLobe10.65
Pituitary9.4
Placenta7.75
Pons10.45
PrefrontalCortex9.75
Prostate9.7
Salivarygland7.05
SkeletalMuscle13.7
Skin8.95
SmoothMuscle10.05
Spinalcord8.25
SubthalamicNucleus8.35
SuperiorCervicalGanglion39.25
TemporalLobe11.6
Testis7.9
TestisGermCell6.5
TestisIntersitial7.5
TestisLeydigCell9.65
TestisSeminiferousTubule8.55
Thalamus8.1
Thymus5.85
Thyroid9.4
Tongue10.65
Tonsil12.15
Trachea6.3
TrigeminalGanglion18.3
Uterus6.7
UterusCorpus10.6
WholeBlood8.6
Wholebrain6.2
colon7.85
pineal_day10.76
pineal_night10.1
retina10.05
small_intestine7.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_676_PI416408490
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.58 ± 0.34
Basal Forebrain5.73 ± 0.2
Basal Part of Pons5.37 ± 0.24
Cerebellar Cortex5.92 ± 0.22
Cerebellar Nuclei5.48 ± 0.38
Claustrum5.86 ± 0.36
Epithalamus5.85 ± 0.27
Frontal Lobe5.45 ± 0.34
Globus Pallidus5.85 ± 0.41
Hypothalamus5.68 ± 0.37
Insula5.68 ± 0.29
Limbic Lobe5.65 ± 0.41
Mesencephalon5.64 ± 0.47
Myelencephalon5.59 ± 0.37
Occipital Lobe5.97 ± 0.27
Parietal Lobe5.67 ± 0.33
Pontine Tegmentum5.75 ± 0.3
Striatum5.6 ± 0.35
Subthalamus5.13 ± 0.62
Temporal Lobe5.54 ± 0.31
Thalamus5.63 ± 0.33
White Matter6.35 ± 0.14
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
ZN197_HUMAN_888 7 888 894 NLMVHQR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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