AutismKB 2.0

Annotation Detail for CD96


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Basic Information Top
Gene Symbol:CD96 ( DKFZp667E2122,MGC22596,TACTILE )
Gene Full Name: CD96 molecule
Band: 3q13.13-q13.2
Quick LinksEntrez ID:10225; OMIM: 606037; Uniprot ID:TACT_HUMAN; ENSEMBL ID: ENSG00000153283; HGNC ID: 16892
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult14 / 19391217
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia2 / 9584220
liver tumor4 / 9635941
lung tumor1 / 1031279
lymphoma4 / 7175555
non-neoplasia0 / 972500 
normal30 / 33603078
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder2 / 2975767
blood10 / 12347880
bone0 / 716550 
bone marrow2 / 4880140
brain2 / 11009891
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine1 / 2344724
kidney0 / 2117770 
larynx0 / 241450 
liver5 / 20774324
lung4 / 33697411
lymph0 / 442700 
lymph node5 / 9161054
mammary gland2 / 15327113
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx5 / 41328120
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate1 / 1893455
salivary gland0 / 201550 
skin2 / 2105749
spleen7 / 53952129
stomach0 / 966190 
testis2 / 3304426
thymus19 / 81131234
thyroid0 / 474730 
tonsil0 / 169990 
trachea4 / 5241376
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206761_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.6
Adipocyte6.55
AdrenalCortex8.05
Adrenalgland6
Amygdala6.95
Appendix9.6
AtrioventricularNode5.95
BDCA4+_DentriticCells7.2
Bonemarrow7.45
BronchialEpithelialCells6.45
CD105+_Endothelial6.75
CD14+_Monocytes7.2
CD19+_BCells(neg._sel.)7
CD33+_Myeloid8.2
CD34+8.15
CD4+_Tcells96.15
CD56+_NKCells195.55
CD71+_EarlyErythroid6.4
CD8+_Tcells142.45
CardiacMyocytes10.6
Caudatenucleus6.15
Cerebellum5.55
CerebellumPeduncles8.05
CiliaryGanglion6.5
CingulateCortex7.25
Colorectaladenocarcinoma6.8
DorsalRootGanglion7.35
FetalThyroid6.75
Fetalbrain6.55
Fetalliver6
Fetallung5.1
GlobusPallidus5.35
Heart10.45
Hypothalamus7.1
Kidney6.15
Leukemia_chronicMyelogenousK-5626.05
Leukemia_promyelocytic-HL-606.05
Leukemialymphoblastic(MOLT-4)7.35
Liver10.2
Lung7.35
Lymphnode7.65
Lymphoma_burkitts(Daudi)8.9
Lymphoma_burkitts(Raji)10.3
MedullaOblongata6.1
OccipitalLobe5.95
OlfactoryBulb5.25
Ovary4.85
Pancreas5.6
PancreaticIslet7.35
ParietalLobe7.7
Pituitary8
Placenta6.75
Pons6.7
PrefrontalCortex8
Prostate8.3
Salivarygland5.7
SkeletalMuscle14.2
Skin8.8
SmoothMuscle7.6
Spinalcord7.15
SubthalamicNucleus6.5
SuperiorCervicalGanglion12.85
TemporalLobe6.35
Testis5.8
TestisGermCell5.45
TestisIntersitial6.1
TestisLeydigCell6.95
TestisSeminiferousTubule5.75
Thalamus6.95
Thymus8.95
Thyroid8.35
Tongue7.75
Tonsil6.7
Trachea5.6
TrigeminalGanglion8
Uterus5.4
UterusCorpus6.8
WholeBlood14.45
Wholebrain5.4
colon6.85
pineal_day8.26
pineal_night8.1
retina8.15
small_intestine6.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P7502
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.19 ± 1.05
Basal Forebrain1.66 ± 0.18
Basal Part of Pons1.3 ± 0.35
Cerebellar Cortex1.56 ± 0.84
Cerebellar Nuclei2.48 ± 0.94
Claustrum2.46 ± 0.79
Epithalamus2.01 ± 0.52
Frontal Lobe1.62 ± 0.72
Globus Pallidus2.77 ± 0.81
Hypothalamus1.87 ± 0.94
Insula1.43 ± 0.39
Limbic Lobe1.76 ± 0.84
Mesencephalon1.94 ± 0.75
Myelencephalon1.82 ± 0.76
Occipital Lobe1.78 ± 0.87
Parietal Lobe1.82 ± 0.86
Pontine Tegmentum1.88 ± 0.72
Striatum2.02 ± 0.89
Subthalamus1.83 ± 0.67
Temporal Lobe1.67 ± 0.72
Thalamus1.73 ± 0.73
White Matter2.43 ± 1.2
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cd96CBCerebellum0.3
0.63
Cd96CTXCerebral cortex0.22
0.54
Cd96HIPHippocampal region0.07
0.12
Cd96HPFHippocampal formation0.47
0.64
Cd96HYHypothalamus1.92
3.7
Cd96LSXLateral septal complex0.39
0.51
Cd96MBMidbrain1.03
1.96
Cd96MYMedulla0.97
1.7
Cd96OLFOlfactory bulb4.23
4.74
Cd96PPons1.18
2.95
Cd96PALPallidum0.27
0.43
Cd96RHPRetrohippocampal region1.48
1.47
Cd96sAMYStriatum-like amygdalar nuclei0.92
0.75
Cd96STRStriatum1.11
1.43
Cd96STRdStriatum dorsal region0.06
0.05
Cd96STRvStriatum ventral region5.14
6.39
Cd96THThalamus0.13
0.19
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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