AutismKB 2.0

Annotation Detail for COQ7


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Basic Information Top
Gene Symbol:COQ7 ( CAT5,CLK-1,CLK1 )
Gene Full Name: coenzyme Q7 homolog, ubiquinone (yeast)
Band: 16p12.3
Quick LinksEntrez ID:10229; OMIM: 601683; Uniprot ID:COQ7_HUMAN; ENSEMBL ID: ENSG00000167186; HGNC ID: 2244
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus9 / 56401215
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult54 / 193912127
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor1 / 3436629
chondrosarcoma4 / 8282348
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor15 / 26384556
glioma1 / 1068839
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal81 / 336030724
ovarian tumor0 / 766820 
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer1 / 1026809
retinoblastoma2 / 4635643
skin tumor3 / 12494924
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone3 / 7165541
bone marrow0 / 488010 
brain12 / 110098910
cervix5 / 48171103
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus1 / 2020949
eye6 / 21105428
heart3 / 8962633
intestine8 / 23447234
kidney6 / 21177728
larynx1 / 2414541
liver0 / 2077430 
lung13 / 33697438
lymph0 / 442700 
lymph node3 / 9161032
mammary gland6 / 15327139
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta13 / 28082546
prostate8 / 18934542
salivary gland0 / 201550 
skin6 / 21057428
spleen0 / 539520 
stomach0 / 966190 
testis12 / 33044236
thymus3 / 8113136
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 210820_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.9
Adipocyte5.55
AdrenalCortex5.8
Adrenalgland4.7
Amygdala6.45
Appendix5.65
AtrioventricularNode4.85
BDCA4+_DentriticCells6.6
Bonemarrow5.25
BronchialEpithelialCells5.55
CD105+_Endothelial6.75
CD14+_Monocytes5.95
CD19+_BCells(neg._sel.)6.05
CD33+_Myeloid8.15
CD34+7.95
CD4+_Tcells6.1
CD56+_NKCells6.45
CD71+_EarlyErythroid5.25
CD8+_Tcells5.45
CardiacMyocytes7.1
Caudatenucleus5
Cerebellum4.55
CerebellumPeduncles6.3
CiliaryGanglion4.05
CingulateCortex5.65
Colorectaladenocarcinoma5.6
DorsalRootGanglion4.35
FetalThyroid5.45
Fetalbrain6
Fetalliver4.75
Fetallung4.6
GlobusPallidus4.1
Heart9.4
Hypothalamus6.2
Kidney4.35
Leukemia_chronicMyelogenousK-5625.05
Leukemia_promyelocytic-HL-605
Leukemialymphoblastic(MOLT-4)4.55
Liver7.45
Lung6.45
Lymphnode4.75
Lymphoma_burkitts(Daudi)7.25
Lymphoma_burkitts(Raji)9.7
MedullaOblongata5.1
OccipitalLobe4.9
OlfactoryBulb4.5
Ovary3.8
Pancreas4.55
PancreaticIslet6.2
ParietalLobe5.8
Pituitary6.5
Placenta5.55
Pons5.35
PrefrontalCortex7.05
Prostate10.95
Salivarygland4.5
SkeletalMuscle6.4
Skin4.4
SmoothMuscle6.4
Spinalcord5.9
SubthalamicNucleus5.15
SuperiorCervicalGanglion6.5
TemporalLobe5.15
Testis9.45
TestisGermCell9.75
TestisIntersitial11.8
TestisLeydigCell8.7
TestisSeminiferousTubule4.85
Thalamus5.7
Thymus4.45
Thyroid7.35
Tongue5.5
Tonsil5.45
Trachea4.7
TrigeminalGanglion7.3
Uterus5.85
UterusCorpus5.1
WholeBlood6.1
Wholebrain5.8
colon6.7
pineal_day7.08
pineal_night6.9
retina6.85
small_intestine5.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P152322
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.84 ± 0.38
Basal Forebrain6 ± 0.14
Basal Part of Pons6.12 ± 0.13
Cerebellar Cortex6.09 ± 0.33
Cerebellar Nuclei6.01 ± 0.45
Claustrum5.67 ± 0.73
Epithalamus6.63 ± 0.61
Frontal Lobe6.05 ± 0.41
Globus Pallidus6.08 ± 0.21
Hypothalamus6.04 ± 0.34
Insula6.13 ± 0.21
Limbic Lobe5.79 ± 0.47
Mesencephalon5.9 ± 0.44
Myelencephalon5.93 ± 0.48
Occipital Lobe5.56 ± 0.42
Parietal Lobe5.95 ± 0.35
Pontine Tegmentum5.97 ± 0.42
Striatum5.67 ± 0.33
Subthalamus6.09 ± 0.14
Temporal Lobe6.14 ± 0.29
Thalamus5.87 ± 0.37
White Matter6.57 ± 0.1
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Coq7CBCerebellum4.66
7.09
Coq7CTXCerebral cortex5.2
4.29
Coq7HIPHippocampal region12.17
13.2
Coq7HPFHippocampal formation11.79
11.66
Coq7HYHypothalamus25.22
21.59
Coq7LSXLateral septal complex2.72
4.37
Coq7MBMidbrain8.92
10.1
Coq7MYMedulla16.26
25.57
Coq7OLFOlfactory bulb14.1
11.42
Coq7PPons26.58
36.95
Coq7PALPallidum11.16
10.99
Coq7RHPRetrohippocampal region11.08
9.36
Coq7sAMYStriatum-like amygdalar nuclei4.26
3.13
Coq7STRStriatum1.98
2.01
Coq7STRdStriatum dorsal region0.65
0.91
Coq7STRvStriatum ventral region4.62
3.51
Coq7THThalamus16.03
14.1
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00067664 27 174 200 FRDEELEHHDIGLDHDAELAPAYAVLK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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