AutismKB 2.0

Annotation Detail for CCNO


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Basic Information Top
Gene Symbol:CCNO ( CCNU,FLJ22422,UDG2,UNG2 )
Gene Full Name: cyclin O
Band: 5q11.2
Quick LinksEntrez ID:10309; OMIM: 607752; Uniprot ID:CCNO_HUMAN; ENSEMBL ID: ENSG00000152669; HGNC ID: 18576
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult29 / 193912114
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor1 / 3436629
chondrosarcoma3 / 8282336
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor6 / 11936950
germ cell tumor0 / 2638450 
glioma2 / 10688318
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor1 / 9635910
lung tumor7 / 10312767
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal24 / 33603077
ovarian tumor5 / 7668265
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer2 / 10268019
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites4 / 4001599
bladder2 / 2975767
blood0 / 1234780 
bone3 / 7165541
bone marrow0 / 488010 
brain12 / 110098910
cervix3 / 4817162
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine5 / 23447221
kidney3 / 21177714
larynx0 / 241450 
liver5 / 20774324
lung12 / 33697435
lymph0 / 442700 
lymph node0 / 916100 
mammary gland3 / 15327119
mouth3 / 6705244
muscle0 / 1077150 
nerve0 / 157680 
ovary5 / 10205148
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate3 / 18934515
salivary gland0 / 201550 
skin1 / 2105744
spleen0 / 539520 
stomach2 / 9661920
testis3 / 3304429
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus8 / 23287834
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 210021_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.75
Adipocyte4.85
AdrenalCortex5.25
Adrenalgland4.25
Amygdala5.2
Appendix5.15
AtrioventricularNode4.05
BDCA4+_DentriticCells5.1
Bonemarrow4.95
BronchialEpithelialCells4.85
CD105+_Endothelial4.8
CD14+_Monocytes5.1
CD19+_BCells(neg._sel.)5.05
CD33+_Myeloid6.05
CD34+5.95
CD4+_Tcells5.1
CD56+_NKCells5.6
CD71+_EarlyErythroid4.6
CD8+_Tcells4.5
CardiacMyocytes6.7
Caudatenucleus6.6
Cerebellum4.05
CerebellumPeduncles5.6
CiliaryGanglion3.45
CingulateCortex5.1
Colorectaladenocarcinoma5.3
DorsalRootGanglion3.85
FetalThyroid4.8
Fetalbrain4.9
Fetalliver4.35
Fetallung5.55
GlobusPallidus3.65
Heart6.65
Hypothalamus5.4
Kidney4.05
Leukemia_chronicMyelogenousK-5624.75
Leukemia_promyelocytic-HL-604.35
Leukemialymphoblastic(MOLT-4)3.95
Liver6.6
Lung5.5
Lymphnode4.25
Lymphoma_burkitts(Daudi)6.3
Lymphoma_burkitts(Raji)7.1
MedullaOblongata4.6
OccipitalLobe4.5
OlfactoryBulb3.85
Ovary3.25
Pancreas4.1
PancreaticIslet5.3
ParietalLobe5.25
Pituitary6.05
Placenta4.9
Pons5.1
PrefrontalCortex6.15
Prostate6.5
Salivarygland3.95
SkeletalMuscle6.4
Skin3.85
SmoothMuscle5.75
Spinalcord5.3
SubthalamicNucleus4.5
SuperiorCervicalGanglion6
TemporalLobe4.55
Testis9.7
TestisGermCell6.1
TestisIntersitial4.3
TestisLeydigCell6.45
TestisSeminiferousTubule5.8
Thalamus5
Thymus3.9
Thyroid7.5
Tongue4.9
Tonsil4.8
Trachea6
TrigeminalGanglion4.95
Uterus4
UterusCorpus4.5
WholeBlood5.25
Wholebrain4.3
colon4.9
pineal_day6
pineal_night5.9
retina5.925
small_intestine4.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P92860
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.22 ± 0.87
Basal Forebrain5.04 ± 0.8
Basal Part of Pons3.8 ± 0.39
Cerebellar Cortex4.95 ± 0.32
Cerebellar Nuclei4.44 ± 0.5
Claustrum3.44 ± 1.13
Epithalamus7.04 ± 1.07
Frontal Lobe4.6 ± 0.86
Globus Pallidus1.78 ± 1.17
Hypothalamus6.09 ± 1
Insula5.1 ± 0.61
Limbic Lobe4.65 ± 1.13
Mesencephalon4.83 ± 0.98
Myelencephalon4.79 ± 1.06
Occipital Lobe5.68 ± 0.65
Parietal Lobe5.35 ± 0.82
Pontine Tegmentum5.03 ± 1
Striatum6.01 ± 0.58
Subthalamus4.74 ± 0.36
Temporal Lobe4.93 ± 0.78
Thalamus3.88 ± 0.74
White Matter1.67 ± 1.05
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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