AutismKB 2.0

Annotation Detail for CITED2


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Basic Information Top
Gene Symbol:CITED2 ( MRG1,P35SRJ )
Gene Full Name: Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
Band: 6q24.1
Quick LinksEntrez ID:10370; OMIM: 602937; Uniprot ID:CITE2_HUMAN; ENSEMBL ID: ENSG00000164442; HGNC ID: 1987
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body8 / 70761113
blastocyst11 / 62319176
fetus49 / 56401286
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult163 / 193912184
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor6 / 9417863
cervical tumor0 / 343660 
chondrosarcoma30 / 82823362
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor9 / 11936975
germ cell tumor4 / 26384515
glioma10 / 10688393
head and neck tumor2 / 13630214
kidney tumor1 / 6895914
leukemia4 / 9584241
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia5 / 9725051
normal249 / 336030774
ovarian tumor5 / 7668265
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites3 / 4001574
bladder1 / 2975733
blood7 / 12347856
bone11 / 71655153
bone marrow3 / 4880161
brain23 / 110098920
cervix4 / 4817183
connective tissue21 / 149255140
ear3 / 16212185
embryonic tissue29 / 215722134
esophagus0 / 202090 
eye29 / 211054137
heart8 / 8962689
intestine4 / 23447217
kidney6 / 21177728
larynx0 / 241450 
liver5 / 20774324
lung36 / 336974106
lymph0 / 442700 
lymph node5 / 9161054
mammary gland9 / 15327158
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary9 / 10205188
pancreas11 / 21481251
parathyroid15 / 20539730
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta23 / 28082581
prostate3 / 18934515
salivary gland0 / 201550 
skin29 / 210574137
spleen0 / 539520 
stomach9 / 9661993
testis8 / 33044224
thymus2 / 8113124
thyroid2 / 4747342
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus17 / 23287872
vascular5 / 5178096
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 207980_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.65
Adipocyte30.85
AdrenalCortex11.2
Adrenalgland12.25
Amygdala9.8
Appendix10.5
AtrioventricularNode7.65
BDCA4+_DentriticCells54.9
Bonemarrow19.65
BronchialEpithelialCells8.85
CD105+_Endothelial29.8
CD14+_Monocytes82.55
CD19+_BCells(neg._sel.)23.75
CD33+_Myeloid213.45
CD34+76.2
CD4+_Tcells40.8
CD56+_NKCells82.95
CD71+_EarlyErythroid61.1
CD8+_Tcells39
CardiacMyocytes26.35
Caudatenucleus8.25
Cerebellum10.15
CerebellumPeduncles12.25
CiliaryGanglion7.75
CingulateCortex9.65
Colorectaladenocarcinoma9.8
DorsalRootGanglion7.9
FetalThyroid16.85
Fetalbrain9.2
Fetalliver21.75
Fetallung45.25
GlobusPallidus7.65
Heart17.25
Hypothalamus8.9
Kidney11.4
Leukemia_chronicMyelogenousK-5628.4
Leukemia_promyelocytic-HL-608.5
Leukemialymphoblastic(MOLT-4)6.7
Liver24.75
Lung148.65
Lymphnode8.75
Lymphoma_burkitts(Daudi)12.1
Lymphoma_burkitts(Raji)16.25
MedullaOblongata8.55
OccipitalLobe9.4
OlfactoryBulb7.1
Ovary54.25
Pancreas8.05
PancreaticIslet132.25
ParietalLobe10.55
Pituitary10.4
Placenta78.35
Pons9.4
PrefrontalCortex10.6
Prostate25
Salivarygland8.65
SkeletalMuscle16.1
Skin9.95
SmoothMuscle28.15
Spinalcord9.9
SubthalamicNucleus9.3
SuperiorCervicalGanglion11.55
TemporalLobe8.65
Testis8.35
TestisGermCell7.4
TestisIntersitial8.15
TestisLeydigCell10.35
TestisSeminiferousTubule7.85
Thalamus10.25
Thymus6.85
Thyroid246.05
Tongue10.7
Tonsil9.9
Trachea18.2
TrigeminalGanglion11.5
Uterus25.7
UterusCorpus11
WholeBlood14.95
Wholebrain23.45
colon21.7
pineal_day13.12
pineal_night20.2
retina44.075
small_intestine18.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P192389
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.04 ± 0.65
Basal Forebrain3.6 ± 0.43
Basal Part of Pons4.58 ± 0.66
Cerebellar Cortex3.97 ± 0.65
Cerebellar Nuclei3.79 ± 0.46
Claustrum4.19 ± 0.89
Epithalamus3.01 ± 0.55
Frontal Lobe3.69 ± 0.7
Globus Pallidus3.25 ± 0.63
Hypothalamus3.62 ± 0.63
Insula3.77 ± 0.58
Limbic Lobe3.8 ± 0.78
Mesencephalon3.81 ± 0.7
Myelencephalon3.89 ± 0.65
Occipital Lobe4.25 ± 0.83
Parietal Lobe4.04 ± 0.63
Pontine Tegmentum3.6 ± 0.69
Striatum3.23 ± 0.73
Subthalamus3.34 ± 0.67
Temporal Lobe3.77 ± 0.62
Thalamus4.15 ± 0.58
White Matter3.14 ± 0.69
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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