AutismKB 2.0

Annotation Detail for CDIPT


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Basic Information Top
Gene Symbol:CDIPT ( MGC1328,PIS,PIS1 )
Gene Full Name: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
Band: 16p11.2
Quick LinksEntrez ID:10423; OMIM: 605893; Uniprot ID:CDIPT_HUMAN; ENSEMBL ID: ENSG00000103502; HGNC ID: 1769
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body9 / 70761127
blastocyst7 / 62319112
fetus59 / 564012104
neonate1 / 3109732
infant8 / 23620338
juvenile10 / 55556179
adult280 / 1939121144
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor5 / 12794390
bladder carcinoma0 / 174750 
breast (mammary gland) tumor16 / 94178169
cervical tumor5 / 34366145
chondrosarcoma8 / 8282396
colorectal tumor4 / 11424635
esophageal tumor1 / 1729057
gastrointestinal tumor21 / 119369175
germ cell tumor33 / 263845125
glioma23 / 106883215
head and neck tumor6 / 13630244
kidney tumor15 / 68959217
leukemia8 / 9584283
liver tumor12 / 96359124
lung tumor14 / 103127135
lymphoma18 / 71755250
non-neoplasia12 / 97250123
normal389 / 3360307115
ovarian tumor13 / 76682169
pancreatic tumor25 / 104616238
primitive neuroectodermal tumor of the CNS35 / 125680278
prostate cancer12 / 102680116
retinoblastoma9 / 46356194
skin tumor10 / 12494980
soft tissue/muscle tissue tumor6 / 12519147
uterine tumor11 / 90257121
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland6 / 33197180
ascites13 / 40015324
bladder0 / 297570 
blood15 / 123478121
bone6 / 7165583
bone marrow3 / 4880161
brain152 / 1100989138
cervix10 / 48171207
connective tissue7 / 14925546
ear0 / 162120 
embryonic tissue26 / 215722120
esophagus3 / 20209148
eye28 / 211054132
heart16 / 89626178
intestine27 / 234472115
kidney29 / 211777136
larynx3 / 24145124
liver17 / 20774381
lung45 / 336974133
lymph11 / 44270248
lymph node6 / 9161065
mammary gland21 / 153271137
mouth0 / 670520 
muscle2 / 10771518
nerve3 / 15768190
ovary19 / 102051186
pancreas29 / 214812135
parathyroid5 / 20539243
pharynx0 / 413280 
pituitary gland2 / 16585120
placenta49 / 280825174
prostate38 / 189345200
salivary gland0 / 201550 
skin19 / 21057490
spleen8 / 53952148
stomach9 / 9661993
testis33 / 33044299
thymus12 / 81131147
thyroid4 / 4747384
tonsil0 / 169990 
trachea4 / 5241376
umbilical cord0 / 136800 
uterus26 / 232878111
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 201253_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts351.3
Adipocyte476.7
AdrenalCortex261.6
Adrenalgland501.4
Amygdala626.7
Appendix254.45
AtrioventricularNode56.8
BDCA4+_DentriticCells555.6
Bonemarrow262.65
BronchialEpithelialCells228.55
CD105+_Endothelial359
CD14+_Monocytes556.5
CD19+_BCells(neg._sel.)414.55
CD33+_Myeloid748.15
CD34+549.2
CD4+_Tcells591.2
CD56+_NKCells879.85
CD71+_EarlyErythroid254.55
CD8+_Tcells470.9
CardiacMyocytes190.8
Caudatenucleus290.1
Cerebellum833.8
CerebellumPeduncles729.5
CiliaryGanglion112.35
CingulateCortex361.9
Colorectaladenocarcinoma270.15
DorsalRootGanglion134.6
FetalThyroid368
Fetalbrain382.65
Fetalliver169.45
Fetallung347.7
GlobusPallidus199.25
Heart1168.15
Hypothalamus715.95
Kidney274.2
Leukemia_chronicMyelogenousK-562110.9
Leukemia_promyelocytic-HL-60153.5
Leukemialymphoblastic(MOLT-4)168.2
Liver739.7
Lung1223.8
Lymphnode321.5
Lymphoma_burkitts(Daudi)171.5
Lymphoma_burkitts(Raji)341.25
MedullaOblongata316.65
OccipitalLobe319.1
OlfactoryBulb282.6
Ovary114.1
Pancreas177
PancreaticIslet413.6
ParietalLobe273.4
Pituitary264.25
Placenta650.55
Pons198.2
PrefrontalCortex741.4
Prostate1127.4
Salivarygland213.35
SkeletalMuscle76
Skin99.4
SmoothMuscle315.5
Spinalcord379.9
SubthalamicNucleus239.65
SuperiorCervicalGanglion104.25
TemporalLobe248.1
Testis336.15
TestisGermCell167.05
TestisIntersitial141.35
TestisLeydigCell85.5
TestisSeminiferousTubule134.9
Thalamus251.25
Thymus531.25
Thyroid1027.55
Tongue169.45
Tonsil117.4
Trachea201.05
TrigeminalGanglion177.25
Uterus582.95
UterusCorpus355.8
WholeBlood836.55
Wholebrain1053.4
colon643.35
pineal_day1236.66
pineal_night1385.68
retina1080.425
small_intestine639.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_7797_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.73 ± 0.72
Basal Forebrain3.51 ± 0.59
Basal Part of Pons3.94 ± 0.82
Cerebellar Cortex4.38 ± 0.62
Cerebellar Nuclei3.73 ± 0.81
Claustrum3.67 ± 0.76
Epithalamus3.89 ± 0.67
Frontal Lobe4.07 ± 0.74
Globus Pallidus2.66 ± 0.61
Hypothalamus3.86 ± 0.64
Insula4.02 ± 0.68
Limbic Lobe3.58 ± 0.72
Mesencephalon3.81 ± 0.81
Myelencephalon3.76 ± 0.83
Occipital Lobe3.17 ± 0.78
Parietal Lobe3.61 ± 0.84
Pontine Tegmentum3.71 ± 0.71
Striatum3.14 ± 0.74
Subthalamus3.72 ± 0.76
Temporal Lobe4.02 ± 0.68
Thalamus3.75 ± 0.68
White Matter2.6 ± 0.89
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
CdiptCBCerebellum35.45
79.52
CdiptCTXCerebral cortex100
100
CdiptHIPHippocampal region72.73
100
CdiptHPFHippocampal formation84.69
93.37
CdiptHYHypothalamus52.61
27.05
CdiptLSXLateral septal complex39.09
18.9
CdiptMBMidbrain55.78
34.66
CdiptMYMedulla57.44
46.71
CdiptOLFOlfactory bulb100
93.45
CdiptPPons60.64
45.54
CdiptPALPallidum57.52
35.62
CdiptRHPRetrohippocampal region100
73.21
CdiptsAMYStriatum-like amygdalar nuclei77.39
40.25
CdiptSTRStriatum52.43
25.4
CdiptSTRdStriatum dorsal region47.12
22.54
CdiptSTRvStriatum ventral region64.9
30.13
CdiptTHThalamus91.94
61.59
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00042576 13 187 199 SLISVIHLITAAR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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