AutismKB 2.0

Annotation Detail for RBM14


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Basic Information Top
Gene Symbol:RBM14 ( COAA,DKFZp779J0927,MGC15912,MGC31756,PSP2,SIP,SYTIP1,TMEM137 )
Gene Full Name: RNA binding motif protein 14
Band: 11q13.2
Quick LinksEntrez ID:10432; OMIM: 612409; Uniprot ID:RBM14_HUMAN; ENSEMBL ID: ENSG00000173933,ENSG00000239306; HGNC ID: 14219
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst20 / 62319320
fetus94 / 564012166
neonate7 / 31097225
infant2 / 2362084
juvenile21 / 55556377
adult214 / 1939121110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor3 / 9417831
cervical tumor3 / 3436687
chondrosarcoma8 / 8282396
colorectal tumor7 / 11424661
esophageal tumor8 / 17290462
gastrointestinal tumor14 / 119369117
germ cell tumor85 / 263845322
glioma21 / 106883196
head and neck tumor29 / 136302212
kidney tumor5 / 6895972
leukemia18 / 95842187
liver tumor10 / 96359103
lung tumor16 / 103127155
lymphoma17 / 71755236
non-neoplasia9 / 9725092
normal398 / 3360307118
ovarian tumor11 / 76682143
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS29 / 125680230
prostate cancer5 / 10268048
retinoblastoma9 / 46356194
skin tumor17 / 124949136
soft tissue/muscle tissue tumor15 / 125191119
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites8 / 40015199
bladder1 / 2975733
blood24 / 123478194
bone5 / 7165569
bone marrow9 / 48801184
brain191 / 1100989173
cervix3 / 4817162
connective tissue14 / 14925593
ear2 / 16212123
embryonic tissue38 / 215722176
esophagus9 / 20209445
eye24 / 211054113
heart9 / 89626100
intestine22 / 23447293
kidney33 / 211777155
larynx3 / 24145124
liver17 / 20774381
lung30 / 33697489
lymph12 / 44270271
lymph node7 / 9161076
mammary gland4 / 15327126
mouth26 / 67052387
muscle8 / 10771574
nerve1 / 1576863
ovary20 / 102051195
pancreas8 / 21481237
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta22 / 28082578
prostate12 / 18934563
salivary gland0 / 201550 
skin22 / 210574104
spleen13 / 53952240
stomach4 / 9661941
testis84 / 330442254
thymus53 / 81131653
thyroid2 / 4747342
tonsil0 / 169990 
trachea8 / 52413152
umbilical cord1 / 1368073
uterus35 / 232878150
vascular12 / 51780231
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204178_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts33.8
Adipocyte3.2
AdrenalCortex3.95
Adrenalgland3.2
Amygdala3.6
Appendix3.85
AtrioventricularNode2.3
BDCA4+_DentriticCells9.95
Bonemarrow3.8
BronchialEpithelialCells3.8
CD105+_Endothelial13.95
CD14+_Monocytes4.95
CD19+_BCells(neg._sel.)7.05
CD33+_Myeloid11.15
CD34+39.8
CD4+_Tcells7.9
CD56+_NKCells8.45
CD71+_EarlyErythroid4.85
CD8+_Tcells9.85
CardiacMyocytes4.7
Caudatenucleus3.4
Cerebellum5.3
CerebellumPeduncles4.35
CiliaryGanglion2.65
CingulateCortex3.9
Colorectaladenocarcinoma3.85
DorsalRootGanglion2.25
FetalThyroid3.7
Fetalbrain3.9
Fetalliver3.3
Fetallung3.15
GlobusPallidus2.75
Heart4.8
Hypothalamus4.25
Kidney3.15
Leukemia_chronicMyelogenousK-5623.5
Leukemia_promyelocytic-HL-604.25
Leukemialymphoblastic(MOLT-4)5.6
Liver5.1
Lung4.4
Lymphnode3.35
Lymphoma_burkitts(Daudi)8.55
Lymphoma_burkitts(Raji)5.45
MedullaOblongata3.5
OccipitalLobe3.4
OlfactoryBulb3.05
Ovary2.35
Pancreas3.05
PancreaticIslet4.1
ParietalLobe4
Pituitary4.45
Placenta4.1
Pons3.6
PrefrontalCortex4.95
Prostate4.9
Salivarygland3.1
SkeletalMuscle4.25
Skin2.45
SmoothMuscle3.75
Spinalcord4.1
SubthalamicNucleus3.45
SuperiorCervicalGanglion4.2
TemporalLobe3.45
Testis8.8
TestisGermCell4.3
TestisIntersitial3.65
TestisLeydigCell3.8
TestisSeminiferousTubule3.45
Thalamus3.9
Thymus11.95
Thyroid4.9
Tongue3.65
Tonsil3.7
Trachea3.2
TrigeminalGanglion3.7
Uterus3.3
UterusCorpus3.4
WholeBlood4.3
Wholebrain3.35
colon3.9
pineal_day9.62
pineal_night11.68
retina9.4
small_intestine3.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P161644
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.85 ± 0.66
Basal Forebrain5.1 ± 0.36
Basal Part of Pons4.67 ± 0.53
Cerebellar Cortex5.4 ± 0.28
Cerebellar Nuclei4.46 ± 0.4
Claustrum5.13 ± 0.71
Epithalamus4.84 ± 0.4
Frontal Lobe4.51 ± 0.54
Globus Pallidus4.59 ± 0.59
Hypothalamus4.22 ± 0.65
Insula4.63 ± 0.45
Limbic Lobe4.93 ± 0.72
Mesencephalon4.83 ± 0.55
Myelencephalon4.83 ± 0.62
Occipital Lobe5.65 ± 0.67
Parietal Lobe4.82 ± 0.54
Pontine Tegmentum4.69 ± 0.71
Striatum5.06 ± 0.61
Subthalamus4.28 ± 0.49
Temporal Lobe4.7 ± 0.56
Thalamus4.75 ± 0.55
White Matter5.66 ± 0.42
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rbm14CBCerebellum0.05
0.24
Rbm14CTXCerebral cortex2.72
1.94
Rbm14HIPHippocampal region18.66
19.9
Rbm14HPFHippocampal formation14.84
14.62
Rbm14HYHypothalamus6.74
5.32
Rbm14LSXLateral septal complex0.14
0.18
Rbm14MBMidbrain0.86
0.93
Rbm14MYMedulla0.3
0.83
Rbm14OLFOlfactory bulb6.18
6.21
Rbm14PPons0.79
2.4
Rbm14PALPallidum4.82
3.8
Rbm14RHPRetrohippocampal region3.79
3.18
Rbm14sAMYStriatum-like amygdalar nuclei19.53
13.47
Rbm14STRStriatum3.23
2.74
Rbm14STRdStriatum dorsal region0.87
0.88
Rbm14STRvStriatum ventral region4.14
4.36
Rbm14THThalamus3.12
2.38
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00008342 17 105 121 VIECDVVKDYAFVHMEK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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