AutismKB 2.0

Annotation Detail for CEBPD


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Basic Information Top
Gene Symbol:CEBPD ( C/EBP-delta,CELF,CRP3,NF-IL6-beta )
Gene Full Name: CCAAT/enhancer binding protein (C/EBP), delta
Band: 8q11.21
Quick LinksEntrez ID:1052; OMIM: 116898; Uniprot ID:CEBPD_HUMAN; ENSEMBL ID: ENSG00000221869; HGNC ID: 1835
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus92 / 564012163
neonate0 / 310970 
infant1 / 2362042
juvenile1 / 5555617
adult214 / 1939121110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma2 / 17475114
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma5 / 8282360
colorectal tumor3 / 11424626
esophageal tumor1 / 1729057
gastrointestinal tumor6 / 11936950
germ cell tumor29 / 263845109
glioma35 / 106883327
head and neck tumor3 / 13630222
kidney tumor2 / 6895929
leukemia5 / 9584252
liver tumor4 / 9635941
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia5 / 9725051
normal416 / 3360307123
ovarian tumor11 / 76682143
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer2 / 10268019
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder0 / 297570 
blood0 / 1234780 
bone9 / 71655125
bone marrow1 / 4880120
brain46 / 110098941
cervix1 / 4817120
connective tissue5 / 14925533
ear8 / 16212493
embryonic tissue1 / 2157224
esophagus1 / 2020949
eye20 / 21105494
heart3 / 8962633
intestine37 / 234472157
kidney174 / 211777821
larynx0 / 241450 
liver11 / 20774352
lung149 / 336974442
lymph0 / 442700 
lymph node2 / 9161021
mammary gland4 / 15327126
mouth0 / 670520 
muscle2 / 10771518
nerve0 / 157680 
ovary16 / 102051156
pancreas21 / 21481297
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta27 / 28082596
prostate33 / 189345174
salivary gland1 / 2015549
skin3 / 21057414
spleen1 / 5395218
stomach3 / 9661931
testis1 / 3304423
thymus2 / 8113124
thyroid2 / 4747342
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus31 / 232878133
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203973_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.3
Adipocyte516.15
AdrenalCortex1041.4
Adrenalgland571.15
Amygdala220.45
Appendix2280.25
AtrioventricularNode1288.95
BDCA4+_DentriticCells1105.2
Bonemarrow539.75
BronchialEpithelialCells550.85
CD105+_Endothelial434.35
CD14+_Monocytes5905.3
CD19+_BCells(neg._sel.)39
CD33+_Myeloid8163.9
CD34+490.2
CD4+_Tcells77.4
CD56+_NKCells1770.7
CD71+_EarlyErythroid25.4
CD8+_Tcells155.6
CardiacMyocytes367.3
Caudatenucleus61.9
Cerebellum32.65
CerebellumPeduncles48.3
CiliaryGanglion1110.25
CingulateCortex68.35
Colorectaladenocarcinoma61.9
DorsalRootGanglion242.55
FetalThyroid1790.1
Fetalbrain237.85
Fetalliver112
Fetallung3069.55
GlobusPallidus33.65
Heart824.05
Hypothalamus147.75
Kidney254.25
Leukemia_chronicMyelogenousK-56248.5
Leukemia_promyelocytic-HL-607.75
Leukemialymphoblastic(MOLT-4)9.75
Liver658.75
Lung8388.05
Lymphnode352.7
Lymphoma_burkitts(Daudi)12.8
Lymphoma_burkitts(Raji)14.65
MedullaOblongata39.95
OccipitalLobe62.3
OlfactoryBulb2075.45
Ovary1653.8
Pancreas389.9
PancreaticIslet2213.1
ParietalLobe40.95
Pituitary767.8
Placenta2501.9
Pons58.8
PrefrontalCortex416.1
Prostate2738.75
Salivarygland412.65
SkeletalMuscle1298.8
Skin350.6
SmoothMuscle1304.85
Spinalcord493.75
SubthalamicNucleus68
SuperiorCervicalGanglion202.85
TemporalLobe61
Testis60.65
TestisGermCell80.75
TestisIntersitial33.4
TestisLeydigCell34.6
TestisSeminiferousTubule89.1
Thalamus67.65
Thymus582.3
Thyroid2091.7
Tongue293.85
Tonsil66.75
Trachea726.45
TrigeminalGanglion2208.75
Uterus994.35
UterusCorpus312.55
WholeBlood3739.75
Wholebrain254.25
colon586.25
pineal_day166.46
pineal_night124.58
retina1532
small_intestine642.15
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_9370_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala14.22 ± 0.39
Basal Forebrain14.16 ± 0.19
Basal Part of Pons14.74 ± 0.22
Cerebellar Cortex14.23 ± 0.29
Cerebellar Nuclei14.31 ± 0.36
Claustrum14.29 ± 0.34
Epithalamus14.39 ± 0.45
Frontal Lobe14.48 ± 0.37
Globus Pallidus14.95 ± 0.33
Hypothalamus14.24 ± 0.55
Insula14.42 ± 0.34
Limbic Lobe14.58 ± 0.36
Mesencephalon14.35 ± 0.29
Myelencephalon14.5 ± 0.38
Occipital Lobe14.48 ± 0.29
Parietal Lobe14.38 ± 0.39
Pontine Tegmentum14.35 ± 0.38
Striatum14.74 ± 0.36
Subthalamus14 ± 0.33
Temporal Lobe14.5 ± 0.35
Thalamus14.48 ± 0.39
White Matter15 ± 0.1
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
CebpdCBCerebellum65.61
86.54
CebpdCTXCerebral cortex100
74.08
CebpdHIPHippocampal region92.54
100
CebpdHPFHippocampal formation100
79.14
CebpdHYHypothalamus39.92
14.15
CebpdLSXLateral septal complex100
49.22
CebpdMBMidbrain53.86
22.98
CebpdMYMedulla52.45
26.42
CebpdOLFOlfactory bulb100
66.45
CebpdPPons58
24.57
CebpdPALPallidum47.52
20.96
CebpdRHPRetrohippocampal region100
56.54
CebpdsAMYStriatum-like amygdalar nuclei64.08
23.53
CebpdSTRStriatum100
42.95
CebpdSTRdStriatum dorsal region100
40.81
CebpdSTRvStriatum ventral region100
60.69
CebpdTHThalamus57.7
19.96
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CEBPD_HUMAN_166 13 166 178 SSPRQTPAPGPAR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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