Annotation Detail for CHERP
Basic Information Top
| Gene Symbol: | CHERP ( DAN16,SCAF6,SRA1 ) |
|---|---|
| Gene Full Name: | calcium homeostasis endoplasmic reticulum protein |
| Band: | 19p13.11 |
| Quick Links | Entrez ID:10523; OMIM: NA; Uniprot ID:CHERP_HUMAN; ENSEMBL ID: ENSG00000085872; HGNC ID: 16930 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 202229_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 5.25 |  |
| Adipocyte | 4.2 | |
| AdrenalCortex | 5.7 | |
| Adrenalgland | 3.65 | |
| Amygdala | 4.3 | |
| Appendix | 4.35 | |
| AtrioventricularNode | 3.35 | |
| BDCA4+_DentriticCells | 4.65 | |
| Bonemarrow | 4.2 | |
| BronchialEpithelialCells | 4.15 | |
| CD105+_Endothelial | 4.2 | |
| CD14+_Monocytes | 4.5 | |
| CD19+_BCells(neg._sel.) | 4.5 | |
| CD33+_Myeloid | 5.45 | |
| CD34+ | 5.35 | |
| CD4+_Tcells | 4.6 | |
| CD56+_NKCells | 4.9 | |
| CD71+_EarlyErythroid | 4.05 | |
| CD8+_Tcells | 4.05 | |
| CardiacMyocytes | 5.3 | |
| Caudatenucleus | 3.8 | |
| Cerebellum | 3.45 | |
| CerebellumPeduncles | 5.05 | |
| CiliaryGanglion | 4.2 | |
| CingulateCortex | 4.45 | |
| Colorectaladenocarcinoma | 4.15 | |
| DorsalRootGanglion | 3.35 | |
| FetalThyroid | 4.3 | |
| Fetalbrain | 4.15 | |
| Fetalliver | 3.65 | |
| Fetallung | 3.4 | |
| GlobusPallidus | 3.35 | |
| Heart | 5.3 | |
| Hypothalamus | 4.6 | |
| Kidney | 3.5 | |
| Leukemia_chronicMyelogenousK-562 | 3.85 | |
| Leukemia_promyelocytic-HL-60 | 3.75 | |
| Leukemialymphoblastic(MOLT-4) | 3.85 | |
| Liver | 5.8 | |
| Lung | 4.6 | |
| Lymphnode | 3.65 | |
| Lymphoma_burkitts(Daudi) | 5.5 | |
| Lymphoma_burkitts(Raji) | 6.05 | |
| MedullaOblongata | 3.85 | |
| OccipitalLobe | 3.8 | |
| OlfactoryBulb | 3.35 | |
| Ovary | 2.9 | |
| Pancreas | 3.45 | |
| PancreaticIslet | 4.5 | |
| ParietalLobe | 4.6 | |
| Pituitary | 4.95 | |
| Placenta | 4.25 | |
| Pons | 4.1 | |
| PrefrontalCortex | 5.15 | |
| Prostate | 4.85 | |
| Salivarygland | 3.5 | |
| SkeletalMuscle | 6 | |
| Skin | 3.55 | |
| SmoothMuscle | 4.75 | |
| Spinalcord | 4.55 | |
| SubthalamicNucleus | 3.9 | |
| SuperiorCervicalGanglion | 4.9 | |
| TemporalLobe | 3.95 | |
| Testis | 3.6 | |
| TestisGermCell | 3.5 | |
| TestisIntersitial | 3.55 | |
| TestisLeydigCell | 4.25 | |
| TestisSeminiferousTubule | 3.7 | |
| Thalamus | 4.6 | |
| Thymus | 3.35 | |
| Thyroid | 5.15 | |
| Tongue | 4.25 | |
| Tonsil | 4.35 | |
| Trachea | 4.25 | |
| TrigeminalGanglion | 4.4 | |
| Uterus | 3.45 | |
| UterusCorpus | 3.8 | |
| WholeBlood | 4.6 | |
| Wholebrain | 3.45 | |
| colon | 4.25 | |
| pineal_day | 5.26 | |
| pineal_night | 5.1 | |
| retina | 5.1 | |
| small_intestine | 4.05 | |
- Probe name: A_23_P16139
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.54 ± 0.46 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.21 ± 0.41 | |
| Basal Part of Pons | 6.18 ± 0.33 | |
| Cerebellar Cortex | 6 ± 0.47 | |
| Cerebellar Nuclei | 5.89 ± 0.57 | |
| Claustrum | 6.62 ± 0.69 | |
| Epithalamus | 5.79 ± 0.34 | |
| Frontal Lobe | 6.09 ± 0.4 | |
| Globus Pallidus | 6.19 ± 0.24 | |
| Hypothalamus | 5.85 ± 0.43 | |
| Insula | 6.21 ± 0.37 | |
| Limbic Lobe | 6.69 ± 0.54 | |
| Mesencephalon | 6.18 ± 0.5 | |
| Myelencephalon | 6.27 ± 0.51 | |
| Occipital Lobe | 6.83 ± 0.57 | |
| Parietal Lobe | 6.32 ± 0.47 | |
| Pontine Tegmentum | 6.21 ± 0.56 | |
| Striatum | 6.35 ± 0.59 | |
| Subthalamus | 5.88 ± 0.29 | |
| Temporal Lobe | 6.23 ± 0.5 | |
| Thalamus | 6.19 ± 0.45 | |
| White Matter | 6.41 ± 0.58 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cherp | CB | Cerebellum | 100 |  |
| 100 | | |||
| Cherp | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Cherp | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Cherp | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Cherp | HY | Hypothalamus | 100 | |
| 100 | | |||
| Cherp | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Cherp | MB | Midbrain | 100 | |
| 100 | | |||
| Cherp | MY | Medulla | 100 | |
| 100 | | |||
| Cherp | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Cherp | P | Pons | 100 | |
| 100 | | |||
| Cherp | PAL | Pallidum | 100 | |
| 100 | | |||
| Cherp | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Cherp | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Cherp | STR | Striatum | 100 | |
| 100 | | |||
| Cherp | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Cherp | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Cherp | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00007353 | 13 | 186 | 198 | SPPHCELMAGHLR | Peptide Atlas |