Annotation Detail for BATF


Gene Symbol: | BATF ( B-ATF,BATF1,SFA-2,SFA2 ) |
---|---|
Gene Full Name: | basic leucine zipper transcription factor, ATF-like |
Band: | 14q24.3 |
Quick Links | Entrez ID:10538; OMIM: 612476; Uniprot ID:BATF_HUMAN; ENSEMBL ID: ENSG00000156127; HGNC ID: 958 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.509964
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
embryoid body | 0 / 70761 | 0 | |
blastocyst | 0 / 62319 | 0 | |
fetus | 4 / 564012 | 7 | ![]() |
neonate | 0 / 31097 | 0 | |
infant | 0 / 23620 | 0 | |
juvenile | 0 / 55556 | 0 | |
adult | 14 / 1939121 | 7 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adrenal tumor | 0 / 12794 | 0 | |
bladder carcinoma | 0 / 17475 | 0 | |
breast (mammary gland) tumor | 2 / 94178 | 21 | ![]() |
cervical tumor | 0 / 34366 | 0 | |
chondrosarcoma | 0 / 82823 | 0 | |
colorectal tumor | 0 / 114246 | 0 | |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 1 / 119369 | 8 | ![]() |
germ cell tumor | 3 / 263845 | 11 | ![]() |
glioma | 0 / 106883 | 0 | |
head and neck tumor | 0 / 136302 | 0 | |
kidney tumor | 0 / 68959 | 0 | |
leukemia | 1 / 95842 | 10 | ![]() |
liver tumor | 0 / 96359 | 0 | |
lung tumor | 0 / 103127 | 0 | |
lymphoma | 1 / 71755 | 13 | ![]() |
non-neoplasia | 1 / 97250 | 10 | ![]() |
normal | 23 / 3360307 | 6 | ![]() |
ovarian tumor | 0 / 76682 | 0 | |
pancreatic tumor | 0 / 104616 | 0 | |
primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
prostate cancer | 0 / 102680 | 0 | |
retinoblastoma | 0 / 46356 | 0 | |
skin tumor | 4 / 124949 | 32 | ![]() |
soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
uterine tumor | 0 / 90257 | 0 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 0 / 33197 | 0 | |
ascites | 1 / 40015 | 24 | ![]() |
bladder | 0 / 29757 | 0 | |
blood | 4 / 123478 | 32 | ![]() |
bone | 0 / 71655 | 0 | |
bone marrow | 0 / 48801 | 0 | |
brain | 0 / 1100989 | 0 | |
cervix | 0 / 48171 | 0 | |
connective tissue | 2 / 149255 | 13 | ![]() |
ear | 0 / 16212 | 0 | |
embryonic tissue | 0 / 215722 | 0 | |
esophagus | 0 / 20209 | 0 | |
eye | 0 / 211054 | 0 | |
heart | 0 / 89626 | 0 | |
intestine | 1 / 234472 | 4 | ![]() |
kidney | 0 / 211777 | 0 | |
larynx | 0 / 24145 | 0 | |
liver | 0 / 207743 | 0 | |
lung | 8 / 336974 | 23 | ![]() |
lymph | 1 / 44270 | 22 | ![]() |
lymph node | 3 / 91610 | 32 | ![]() |
mammary gland | 2 / 153271 | 13 | ![]() |
mouth | 0 / 67052 | 0 | |
muscle | 0 / 107715 | 0 | |
nerve | 0 / 15768 | 0 | |
ovary | 0 / 102051 | 0 | |
pancreas | 0 / 214812 | 0 | |
parathyroid | 0 / 20539 | 0 | |
pharynx | 0 / 41328 | 0 | |
pituitary gland | 0 / 16585 | 0 | |
placenta | 0 / 280825 | 0 | |
prostate | 1 / 189345 | 5 | ![]() |
salivary gland | 0 / 20155 | 0 | |
skin | 4 / 210574 | 18 | ![]() |
spleen | 0 / 53952 | 0 | |
stomach | 2 / 96619 | 20 | ![]() |
testis | 0 / 330442 | 0 | |
thymus | 0 / 81131 | 0 | |
thyroid | 0 / 47473 | 0 | |
tonsil | 2 / 16999 | 117 | ![]() |
trachea | 0 / 52413 | 0 | |
umbilical cord | 0 / 13680 | 0 | |
uterus | 1 / 232878 | 4 | ![]() |
vascular | 1 / 51780 | 19 | ![]() |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 205965_at
Cell line | Expression level | Expression bar |
---|---|---|
![]() | ||
721_B_lymphoblasts | 70.05 | ![]() |
Adipocyte | 5.65 | ![]() |
AdrenalCortex | 6 | ![]() |
Adrenalgland | 4.85 | ![]() |
Amygdala | 6.15 | ![]() |
Appendix | 7.85 | ![]() |
AtrioventricularNode | 4.85 | ![]() |
BDCA4+_DentriticCells | 7.5 | ![]() |
Bonemarrow | 7.2 | ![]() |
BronchialEpithelialCells | 5.55 | ![]() |
CD105+_Endothelial | 5.9 | ![]() |
CD14+_Monocytes | 11.05 | ![]() |
CD19+_BCells(neg._sel.) | 9.95 | ![]() |
CD33+_Myeloid | 22.45 | ![]() |
CD34+ | 12.2 | ![]() |
CD4+_Tcells | 51.25 | ![]() |
CD56+_NKCells | 70.15 | ![]() |
CD71+_EarlyErythroid | 6.9 | ![]() |
CD8+_Tcells | 34.4 | ![]() |
CardiacMyocytes | 7.2 | ![]() |
Caudatenucleus | 5.6 | ![]() |
Cerebellum | 4.65 | ![]() |
CerebellumPeduncles | 6.95 | ![]() |
CiliaryGanglion | 4.2 | ![]() |
CingulateCortex | 6 | ![]() |
Colorectaladenocarcinoma | 5.85 | ![]() |
DorsalRootGanglion | 4.5 | ![]() |
FetalThyroid | 5.65 | ![]() |
Fetalbrain | 5.85 | ![]() |
Fetalliver | 4.95 | ![]() |
Fetallung | 4.9 | ![]() |
GlobusPallidus | 4.25 | ![]() |
Heart | 7.35 | ![]() |
Hypothalamus | 6.25 | ![]() |
Kidney | 4.7 | ![]() |
Leukemia_chronicMyelogenousK-562 | 5.85 | ![]() |
Leukemia_promyelocytic-HL-60 | 5.1 | ![]() |
Leukemialymphoblastic(MOLT-4) | 5.45 | ![]() |
Liver | 7.85 | ![]() |
Lung | 10.2 | ![]() |
Lymphnode | 7.45 | ![]() |
Lymphoma_burkitts(Daudi) | 7.4 | ![]() |
Lymphoma_burkitts(Raji) | 12.25 | ![]() |
MedullaOblongata | 5.3 | ![]() |
OccipitalLobe | 5.2 | ![]() |
OlfactoryBulb | 4.45 | ![]() |
Ovary | 4.05 | ![]() |
Pancreas | 4.6 | ![]() |
PancreaticIslet | 6.4 | ![]() |
ParietalLobe | 6.1 | ![]() |
Pituitary | 6.8 | ![]() |
Placenta | 5.25 | ![]() |
Pons | 5.6 | ![]() |
PrefrontalCortex | 6.95 | ![]() |
Prostate | 6.9 | ![]() |
Salivarygland | 4.7 | ![]() |
SkeletalMuscle | 6.8 | ![]() |
Skin | 4.65 | ![]() |
SmoothMuscle | 6.65 | ![]() |
Spinalcord | 6.3 | ![]() |
SubthalamicNucleus | 5.25 | ![]() |
SuperiorCervicalGanglion | 6.5 | ![]() |
TemporalLobe | 5.3 | ![]() |
Testis | 4.95 | ![]() |
TestisGermCell | 4.75 | ![]() |
TestisIntersitial | 6 | ![]() |
TestisLeydigCell | 6.15 | ![]() |
TestisSeminiferousTubule | 5.05 | ![]() |
Thalamus | 5.9 | ![]() |
Thymus | 4.5 | ![]() |
Thyroid | 7.1 | ![]() |
Tongue | 5.8 | ![]() |
Tonsil | 7.65 | ![]() |
Trachea | 4.85 | ![]() |
TrigeminalGanglion | 6 | ![]() |
Uterus | 4.7 | ![]() |
UterusCorpus | 5.1 | ![]() |
WholeBlood | 10.2 | ![]() |
Wholebrain | 4.75 | ![]() |
colon | 5.85 | ![]() |
pineal_day | 6.52 | ![]() |
pineal_night | 6.44 | ![]() |
retina | 7.1 | ![]() |
small_intestine | 5.6 | ![]() |
- Probe name: A_23_P128974
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 3.25 ± 1.26 | ![]() ![]() ![]() |
Basal Forebrain | 3.12 ± 0.78 | ![]() ![]() ![]() |
Basal Part of Pons | 3.38 ± 1.18 | ![]() ![]() ![]() |
Cerebellar Cortex | 2.28 ± 0.46 | ![]() ![]() ![]() |
Cerebellar Nuclei | 3.55 ± 0.6 | ![]() ![]() ![]() |
Claustrum | 3.28 ± 1.07 | ![]() ![]() ![]() |
Epithalamus | 3.29 ± 1.22 | ![]() ![]() ![]() |
Frontal Lobe | 3 ± 1.16 | ![]() ![]() ![]() |
Globus Pallidus | 4.3 ± 0.85 | ![]() ![]() ![]() |
Hypothalamus | 2.92 ± 0.73 | ![]() ![]() ![]() |
Insula | 3.48 ± 0.79 | ![]() ![]() ![]() |
Limbic Lobe | 2.73 ± 1.09 | ![]() ![]() ![]() |
Mesencephalon | 3.35 ± 0.98 | ![]() ![]() ![]() |
Myelencephalon | 3.3 ± 0.96 | ![]() ![]() ![]() |
Occipital Lobe | 2.57 ± 0.95 | ![]() ![]() ![]() |
Parietal Lobe | 3.21 ± 1.11 | ![]() ![]() ![]() |
Pontine Tegmentum | 3.4 ± 1.42 | ![]() ![]() ![]() |
Striatum | 6.47 ± 1.13 | ![]() ![]() ![]() |
Subthalamus | 3.14 ± 0.8 | ![]() ![]() ![]() |
Temporal Lobe | 3.49 ± 0.77 | ![]() ![]() ![]() |
Thalamus | 3.19 ± 0.86 | ![]() ![]() ![]() |
White Matter | 2.92 ± 0.62 | ![]() ![]() ![]() |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Batf | CB | Cerebellum | 15.44 | ![]() |
15.97 | ![]() | |||
Batf | CTX | Cerebral cortex | 15.3 | ![]() |
12.88 | ![]() | |||
Batf | HIP | Hippocampal region | 9.69 | ![]() |
11.35 | ![]() | |||
Batf | HPF | Hippocampal formation | 8.33 | ![]() |
8.72 | ![]() | |||
Batf | HY | Hypothalamus | 2.6 | ![]() |
2.3 | ![]() | |||
Batf | LSX | Lateral septal complex | 0.94 | ![]() |
0.67 | ![]() | |||
Batf | MB | Midbrain | 3.17 | ![]() |
3.2 | ![]() | |||
Batf | MY | Medulla | 11.01 | ![]() |
12.95 | ![]() | |||
Batf | OLF | Olfactory bulb | 29.74 | ![]() |
27.53 | ![]() | |||
Batf | P | Pons | 5.34 | ![]() |
5.93 | ![]() | |||
Batf | PAL | Pallidum | 2.57 | ![]() |
2.39 | ![]() | |||
Batf | RHP | Retrohippocampal region | 6.2 | ![]() |
5.13 | ![]() | |||
Batf | sAMY | Striatum-like amygdalar nuclei | 3.44 | ![]() |
2.55 | ![]() | |||
Batf | STR | Striatum | 4.8 | ![]() |
3.84 | ![]() | |||
Batf | STRd | Striatum dorsal region | 5.59 | ![]() |
4.56 | ![]() | |||
Batf | STRv | Striatum ventral region | 4.57 | ![]() |
3.46 | ![]() | |||
Batf | TH | Thalamus | 4.25 | ![]() |
3.93 | ![]() |