AutismKB 2.0

Annotation Detail for IFITM2


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Basic Information Top
Gene Symbol:IFITM2 ( 1-8D )
Gene Full Name: interferon induced transmembrane protein 2 (1-8D)
Band: 11p15.5
Quick LinksEntrez ID:10581; OMIM: 605578; Uniprot ID:IFM2_HUMAN; ENSEMBL ID: ENSG00000185201; HGNC ID: 5413
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst2 / 6231932
fetus29 / 56401251
neonate4 / 31097128
infant1 / 2362042
juvenile3 / 5555653
adult269 / 1939121138
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma1 / 1747557
breast (mammary gland) tumor9 / 9417895
cervical tumor3 / 3436687
chondrosarcoma11 / 82823132
colorectal tumor10 / 11424687
esophageal tumor0 / 172900 
gastrointestinal tumor12 / 119369100
germ cell tumor87 / 263845329
glioma1 / 1068839
head and neck tumor8 / 13630258
kidney tumor11 / 68959159
leukemia32 / 95842333
liver tumor17 / 96359176
lung tumor25 / 103127242
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal308 / 336030791
ovarian tumor3 / 7668239
pancreatic tumor19 / 104616181
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer22 / 102680214
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor8 / 12519163
uterine tumor7 / 9025777
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue3 / 13106228
adrenal gland3 / 3319790
ascites9 / 40015224
bladder1 / 2975733
blood39 / 123478315
bone16 / 71655223
bone marrow39 / 48801799
brain33 / 110098929
cervix3 / 4817162
connective tissue8 / 14925553
ear1 / 1621261
embryonic tissue25 / 215722115
esophagus0 / 202090 
eye13 / 21105461
heart8 / 8962689
intestine19 / 23447281
kidney14 / 21177766
larynx1 / 2414541
liver37 / 207743178
lung62 / 336974183
lymph0 / 442700 
lymph node1 / 9161010
mammary gland18 / 153271117
mouth2 / 6705229
muscle6 / 10771555
nerve1 / 1576863
ovary4 / 10205139
pancreas29 / 214812135
parathyroid5 / 20539243
pharynx3 / 4132872
pituitary gland1 / 1658560
placenta18 / 28082564
prostate33 / 189345174
salivary gland14 / 20155694
skin5 / 21057423
spleen6 / 53952111
stomach10 / 96619103
testis88 / 330442266
thymus1 / 8113112
thyroid5 / 47473105
tonsil2 / 16999117
trachea0 / 524130 
umbilical cord4 / 13680292
uterus28 / 232878120
vascular17 / 51780328
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 201315_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts588.05
Adipocyte1654.2
AdrenalCortex519.9
Adrenalgland567.55
Amygdala199.65
Appendix1429.45
AtrioventricularNode1047.5
BDCA4+_DentriticCells501.15
Bonemarrow1514.15
BronchialEpithelialCells684.25
CD105+_Endothelial138
CD14+_Monocytes1482.85
CD19+_BCells(neg._sel.)763.25
CD33+_Myeloid1219.05
CD34+340.25
CD4+_Tcells1289.2
CD56+_NKCells2885.15
CD71+_EarlyErythroid34.85
CD8+_Tcells1234.85
CardiacMyocytes1320.95
Caudatenucleus155.85
Cerebellum90.15
CerebellumPeduncles137.15
CiliaryGanglion611.4
CingulateCortex149
Colorectaladenocarcinoma1266.1
DorsalRootGanglion1089.35
FetalThyroid1267.4
Fetalbrain106.15
Fetalliver138.85
Fetallung2294.15
GlobusPallidus77.75
Heart2533.45
Hypothalamus449.25
Kidney516.6
Leukemia_chronicMyelogenousK-562965.1
Leukemia_promyelocytic-HL-6016.85
Leukemialymphoblastic(MOLT-4)49.3
Liver2591.75
Lung1656.25
Lymphnode881.25
Lymphoma_burkitts(Daudi)74.8
Lymphoma_burkitts(Raji)17.4
MedullaOblongata118.35
OccipitalLobe149.8
OlfactoryBulb1888.25
Ovary2502.9
Pancreas751.05
PancreaticIslet1468.85
ParietalLobe119.2
Pituitary312.15
Placenta1361.3
Pons112.5
PrefrontalCortex784.75
Prostate847.6
Salivarygland248.35
SkeletalMuscle394.4
Skin437.4
SmoothMuscle1614.55
Spinalcord538.3
SubthalamicNucleus166.05
SuperiorCervicalGanglion445.45
TemporalLobe238.75
Testis421.55
TestisGermCell677.05
TestisIntersitial275.3
TestisLeydigCell337.55
TestisSeminiferousTubule536.3
Thalamus272.3
Thymus715.45
Thyroid764.8
Tongue424.9
Tonsil709.3
Trachea457.55
TrigeminalGanglion1073.55
Uterus1566.35
UterusCorpus1242.95
WholeBlood11502.45
Wholebrain193.25
colon628.9
pineal_day207.82
pineal_night203.18
retina1697.075
small_intestine858
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5128_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.71 ± 0.47
Basal Forebrain9.11 ± 0.16
Basal Part of Pons8.68 ± 0.43
Cerebellar Cortex8.75 ± 0.17
Cerebellar Nuclei9.56 ± 0.24
Claustrum8.23 ± 0.43
Epithalamus9.64 ± 0.41
Frontal Lobe9.11 ± 0.43
Globus Pallidus10.27 ± 0.37
Hypothalamus9.3 ± 0.57
Insula9.1 ± 0.34
Limbic Lobe8.92 ± 0.5
Mesencephalon9.26 ± 0.54
Myelencephalon9.29 ± 0.5
Occipital Lobe9.42 ± 0.49
Parietal Lobe9.02 ± 0.44
Pontine Tegmentum9.31 ± 0.46
Striatum10.09 ± 0.45
Subthalamus9.33 ± 0.49
Temporal Lobe9.08 ± 0.35
Thalamus9.42 ± 0.36
White Matter8.97 ± 1.14
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00075019 16 88 103 MVGDVTGAQAYASTAK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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