AutismKB 2.0

Annotation Detail for ZMYND11


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Basic Information Top
Gene Symbol:ZMYND11 ( BRAM1,BS69,MGC111056 )
Gene Full Name: zinc finger, MYND domain containing 11
Band: 10p15.3
Quick LinksEntrez ID:10771; OMIM: 608668; Uniprot ID:ZMY11_HUMAN; ENSEMBL ID: ENSG00000015171; HGNC ID: 16966
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst1 / 6231916
fetus50 / 56401288
neonate0 / 310970 
infant2 / 2362084
juvenile5 / 5555689
adult114 / 193912158
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma2 / 17475114
breast (mammary gland) tumor12 / 94178127
cervical tumor2 / 3436658
chondrosarcoma13 / 82823156
colorectal tumor7 / 11424661
esophageal tumor1 / 1729057
gastrointestinal tumor5 / 11936941
germ cell tumor5 / 26384518
glioma7 / 10688365
head and neck tumor10 / 13630273
kidney tumor5 / 6895972
leukemia0 / 958420 
liver tumor9 / 9635993
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia9 / 9725092
normal241 / 336030771
ovarian tumor6 / 7668278
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS7 / 12568055
prostate cancer2 / 10268019
retinoblastoma1 / 4635621
skin tumor7 / 12494956
soft tissue/muscle tissue tumor13 / 125191103
uterine tumor9 / 9025799
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder4 / 29757134
blood0 / 1234780 
bone9 / 71655125
bone marrow0 / 488010 
brain95 / 110098986
cervix2 / 4817141
connective tissue8 / 14925553
ear11 / 16212678
embryonic tissue12 / 21572255
esophagus1 / 2020949
eye6 / 21105428
heart4 / 8962644
intestine15 / 23447263
kidney15 / 21177770
larynx1 / 2414541
liver13 / 20774362
lung21 / 33697462
lymph0 / 442700 
lymph node1 / 9161010
mammary gland18 / 153271117
mouth6 / 6705289
muscle8 / 10771574
nerve1 / 1576863
ovary6 / 10205158
pancreas9 / 21481241
parathyroid8 / 20539389
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta4 / 28082514
prostate6 / 18934531
salivary gland0 / 201550 
skin22 / 210574104
spleen2 / 5395237
stomach4 / 9661941
testis17 / 33044251
thymus0 / 811310 
thyroid7 / 47473147
tonsil0 / 169990 
trachea6 / 52413114
umbilical cord0 / 136800 
uterus35 / 232878150
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202137_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.35
Adipocyte6.3
AdrenalCortex7.7
Adrenalgland5.55
Amygdala22.3
Appendix6.95
AtrioventricularNode5.9
BDCA4+_DentriticCells10.6
Bonemarrow6.7
BronchialEpithelialCells6.15
CD105+_Endothelial6.4
CD14+_Monocytes6.85
CD19+_BCells(neg._sel.)6.75
CD33+_Myeloid7.9
CD34+7.8
CD4+_Tcells10.95
CD56+_NKCells19.25
CD71+_EarlyErythroid6.3
CD8+_Tcells8.8
CardiacMyocytes10.5
Caudatenucleus5.95
Cerebellum5.6
CerebellumPeduncles8.1
CiliaryGanglion5.35
CingulateCortex7.5
Colorectaladenocarcinoma6.45
DorsalRootGanglion5.4
FetalThyroid6.95
Fetalbrain21.15
Fetalliver5.7
Fetallung5
GlobusPallidus5.4
Heart8.9
Hypothalamus7.65
Kidney5.6
Leukemia_chronicMyelogenousK-5625.8
Leukemia_promyelocytic-HL-605.7
Leukemialymphoblastic(MOLT-4)4.95
Liver8.9
Lung6.95
Lymphnode5.35
Lymphoma_burkitts(Daudi)8.35
Lymphoma_burkitts(Raji)9.55
MedullaOblongata6
OccipitalLobe12.75
OlfactoryBulb5
Ovary4.9
Pancreas5.3
PancreaticIslet8.15
ParietalLobe7.05
Pituitary7.95
Placenta6.4
Pons6.2
PrefrontalCortex9.35
Prostate7.35
Salivarygland5.7
SkeletalMuscle8.85
Skin5.55
SmoothMuscle7.25
Spinalcord7.1
SubthalamicNucleus7.6
SuperiorCervicalGanglion9.15
TemporalLobe6
Testis5.45
TestisGermCell5.15
TestisIntersitial5.4
TestisLeydigCell6.6
TestisSeminiferousTubule5.5
Thalamus6.75
Thymus4.8
Thyroid15.75
Tongue6.75
Tonsil6.65
Trachea5.55
TrigeminalGanglion7.45
Uterus6.5
UterusCorpus6.2
WholeBlood6.9
Wholebrain12.4
colon6.75
pineal_day13.38
pineal_night10.92
retina8.05
small_intestine6.15
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P75083
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.82 ± 0.35
Basal Forebrain10.46 ± 0.23
Basal Part of Pons10.28 ± 0.29
Cerebellar Cortex10.31 ± 0.24
Cerebellar Nuclei10.27 ± 0.24
Claustrum10.87 ± 0.53
Epithalamus10.29 ± 0.41
Frontal Lobe10.25 ± 0.38
Globus Pallidus10.91 ± 0.14
Hypothalamus10.14 ± 0.33
Insula10.3 ± 0.32
Limbic Lobe10.64 ± 0.38
Mesencephalon10.46 ± 0.31
Myelencephalon10.44 ± 0.35
Occipital Lobe10.73 ± 0.38
Parietal Lobe10.42 ± 0.37
Pontine Tegmentum10.41 ± 0.35
Striatum10.74 ± 0.34
Subthalamus10.38 ± 0.1
Temporal Lobe10.33 ± 0.34
Thalamus10.34 ± 0.28
White Matter11.13 ± 0.47
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Zmynd11CBCerebellum53.04
79.54
Zmynd11CTXCerebral cortex100
100
Zmynd11HIPHippocampal region100
100
Zmynd11HPFHippocampal formation100
100
Zmynd11HYHypothalamus95.54
100
Zmynd11LSXLateral septal complex100
100
Zmynd11MBMidbrain65.78
69.88
Zmynd11MYMedulla52.5
63.36
Zmynd11OLFOlfactory bulb100
100
Zmynd11PPons59.22
67.86
Zmynd11PALPallidum100
100
Zmynd11RHPRetrohippocampal region100
100
Zmynd11sAMYStriatum-like amygdalar nuclei100
100
Zmynd11STRStriatum100
100
Zmynd11STRdStriatum dorsal region100
100
Zmynd11STRvStriatum ventral region100
100
Zmynd11THThalamus79.71
84.72
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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