Annotation Detail for ARPP21
Basic Information Top
| Gene Symbol: | ARPP21 ( ARPP-21,FLJ32997,R3HDM3,RCS,TARPP ) |
|---|---|
| Gene Full Name: | cAMP-regulated phosphoprotein, 21kDa |
| Band: | 3p22.3 |
| Quick Links | Entrez ID:10777; OMIM: 605488; Uniprot ID:ARP21_HUMAN; ENSEMBL ID: ENSG00000172995; HGNC ID: 16968 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.713605
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 55 / 564012 | 97 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 |  |
| juvenile | 1 / 55556 | 17 | |
| adult | 43 / 1939121 | 22 | |
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 19 / 564012 | 33 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 2 / 1939121 | 1 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 20 / 263845 | 75 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 8 / 97250 | 82 | |
| normal | 266 / 3360307 | 79 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 18 / 125191 | 143 | |
| uterine tumor | 0 / 90257 | 0 | |
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 34 / 3360307 | 10 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 258 / 1100989 | 234 |  |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 18 / 149255 | 120 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 6 / 89626 | 66 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 5 / 330442 | 15 | |
| thymus | 63 / 81131 | 776 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 1 / 51780 | 19 | |
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 32 / 1100989 | 29 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 1 / 336974 | 2 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 20 / 81131 | 246 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 220359_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 6.2 | |
| Adipocyte | 5.2 | |
| AdrenalCortex | 5.8 | |
| Adrenalgland | 4.55 | |
| Amygdala | 142 | |
| Appendix | 8.8 | |
| AtrioventricularNode | 4.7 | |
| BDCA4+_DentriticCells | 5.4 | |
| Bonemarrow | 5.7 | |
| BronchialEpithelialCells | 5.15 | |
| CD105+_Endothelial | 5.25 | |
| CD14+_Monocytes | 5.5 | |
| CD19+_BCells(neg._sel.) | 5.55 | |
| CD33+_Myeloid | 6.65 | |
| CD34+ | 6.6 | |
| CD4+_Tcells | 5.5 | |
| CD56+_NKCells | 5.9 | |
| CD71+_EarlyErythroid | 5 | |
| CD8+_Tcells | 4.8 | |
| CardiacMyocytes | 7.1 | |
| Caudatenucleus | 3111.75 |  |
| Cerebellum | 4.3 | |
| CerebellumPeduncles | 6.1 | |
| CiliaryGanglion | 4.05 | |
| CingulateCortex | 28.9 | |
| Colorectaladenocarcinoma | 5.25 | |
| DorsalRootGanglion | 4.25 | |
| FetalThyroid | 5.1 | |
| Fetalbrain | 22.75 | |
| Fetalliver | 4.65 | |
| Fetallung | 4.15 | |
| GlobusPallidus | 13.7 | |
| Heart | 7.05 | |
| Hypothalamus | 12.2 | |
| Kidney | 4.45 | |
| Leukemia_chronicMyelogenousK-562 | 4.75 | |
| Leukemia_promyelocytic-HL-60 | 4.65 | |
| Leukemialymphoblastic(MOLT-4) | 4.2 | |
| Liver | 7.1 | |
| Lung | 5.75 | |
| Lymphnode | 4.5 | |
| Lymphoma_burkitts(Daudi) | 6.85 | |
| Lymphoma_burkitts(Raji) | 7.55 | |
| MedullaOblongata | 594.35 | |
| OccipitalLobe | 68.65 | |
| OlfactoryBulb | 4.15 | |
| Ovary | 3.55 | |
| Pancreas | 4.25 | |
| PancreaticIslet | 5.65 | |
| ParietalLobe | 14.25 | |
| Pituitary | 6.15 | |
| Placenta | 5.25 | |
| Pons | 436.5 | |
| PrefrontalCortex | 43.3 | |
| Prostate | 6.1 | |
| Salivarygland | 4.25 | |
| SkeletalMuscle | 7.15 | |
| Skin | 4.85 | |
| SmoothMuscle | 5.85 | |
| Spinalcord | 5.65 | |
| SubthalamicNucleus | 12.7 | |
| SuperiorCervicalGanglion | 7.7 | |
| TemporalLobe | 13.9 | |
| Testis | 4.5 | |
| TestisGermCell | 4.3 | |
| TestisIntersitial | 4.45 | |
| TestisLeydigCell | 5.3 | |
| TestisSeminiferousTubule | 4.5 | |
| Thalamus | 21 | |
| Thymus | 4.1 | |
| Thyroid | 6.4 | |
| Tongue | 5.55 | |
| Tonsil | 5.1 | |
| Trachea | 4.45 | |
| TrigeminalGanglion | 6.1 | |
| Uterus | 4.25 | |
| UterusCorpus | 4.95 | |
| WholeBlood | 5.65 | |
| Wholebrain | 146.4 | |
| colon | 5.25 | |
| pineal_day | 6.44 | |
| pineal_night | 6.32 | |
| retina | 6.3 | |
| small_intestine | 5.05 | |
- Probe name: A_23_P315602
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.87 ± 0.76 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.87 ± 0.5 | |
| Basal Part of Pons | 9.27 ± 0.38 | |
| Cerebellar Cortex | 8.79 ± 0.19 | |
| Cerebellar Nuclei | 7.81 ± 0.79 | |
| Claustrum | 8.07 ± 0.75 | |
| Epithalamus | 6.82 ± 0.82 | |
| Frontal Lobe | 8.38 ± 0.53 | |
| Globus Pallidus | 5.76 ± 0.6 | |
| Hypothalamus | 7.67 ± 0.77 | |
| Insula | 8.42 ± 0.35 | |
| Limbic Lobe | 8.06 ± 0.83 | |
| Mesencephalon | 7.54 ± 0.82 | |
| Myelencephalon | 7.94 ± 0.97 | |
| Occipital Lobe | 8.08 ± 0.64 | |
| Parietal Lobe | 8.09 ± 0.81 | |
| Pontine Tegmentum | 7.93 ± 0.58 | |
| Striatum | 7 ± 0.94 | |
| Subthalamus | 8.84 ± 0.12 | |
| Temporal Lobe | 8.33 ± 0.55 | |
| Thalamus | 7.98 ± 0.6 | |
| White Matter | 5.35 ± 0.54 | |
Mouse Brain ISH 