Annotation Detail for SDCCAG8
Basic Information Top
| Gene Symbol: | SDCCAG8 ( CCCAP,NY-CO-8,hCCCAP ) |
|---|---|
| Gene Full Name: | serologically defined colon cancer antigen 8 |
| Band: | 1q43-q44 |
| Quick Links | Entrez ID:10806; OMIM: 613524; Uniprot ID:SDCG8_HUMAN; ENSEMBL ID: ENSG00000054282; HGNC ID: 10671 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591530
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 24 / 564012 | 42 | |
| neonate | 2 / 31097 | 64 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 90 / 1939121 | 46 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 12 / 263845 | 45 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 126 / 3360307 | 37 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 23 / 125191 | 183 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 3 / 29757 | 100 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 32 / 1100989 | 29 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 27 / 149255 | 180 | |
| ear | 3 / 16212 | 185 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 2 / 89626 | 22 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 2 / 24145 | 82 | |
| liver | 8 / 207743 | 38 | |
| lung | 8 / 336974 | 23 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 7 / 107715 | 64 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 11 / 214812 | 51 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 13 / 280825 | 46 | |
| prostate | 8 / 189345 | 42 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 13 / 330442 | 39 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 6 / 47473 | 126 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_24_P179489
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.48 ± 0.45 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.3 ± 0.2 | |
| Basal Part of Pons | 6.56 ± 0.2 | |
| Cerebellar Cortex | 6.14 ± 0.16 | |
| Cerebellar Nuclei | 6.4 ± 0.36 | |
| Claustrum | 6.63 ± 0.33 | |
| Epithalamus | 6.93 ± 0.46 | |
| Frontal Lobe | 6.44 ± 0.35 | |
| Globus Pallidus | 7.26 ± 0.23 | |
| Hypothalamus | 6.29 ± 0.48 | |
| Insula | 6.39 ± 0.31 | |
| Limbic Lobe | 6.41 ± 0.26 | |
| Mesencephalon | 6.42 ± 0.4 | |
| Myelencephalon | 6.43 ± 0.39 | |
| Occipital Lobe | 6.56 ± 0.22 | |
| Parietal Lobe | 6.55 ± 0.29 | |
| Pontine Tegmentum | 6.44 ± 0.31 | |
| Striatum | 6.57 ± 0.31 | |
| Subthalamus | 6.59 ± 0.01 | |
| Temporal Lobe | 6.38 ± 0.39 | |
| Thalamus | 6.48 ± 0.31 | |
| White Matter | 7.45 ± 0.3 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Sdccag8 | CB | Cerebellum | 13.48 | |
| 15.75 | | |||
| Sdccag8 | CTX | Cerebral cortex | 30.74 | |
| 21.42 | | |||
| Sdccag8 | HIP | Hippocampal region | 25.35 | |
| 30.57 | | |||
| Sdccag8 | HPF | Hippocampal formation | 24.72 | |
| 25.08 | | |||
| Sdccag8 | HY | Hypothalamus | 16.93 | |
| 13.56 | | |||
| Sdccag8 | LSX | Lateral septal complex | 4.51 | |
| 3.24 | | |||
| Sdccag8 | MB | Midbrain | 9 | |
| 8.22 | | |||
| Sdccag8 | MY | Medulla | 31.1 | |
| 32.61 | | |||
| Sdccag8 | OLF | Olfactory bulb | 33.84 | |
| 26.62 | | |||
| Sdccag8 | P | Pons | 13.49 | |
| 13.43 | | |||
| Sdccag8 | PAL | Pallidum | 8.79 | |
| 6.74 | | |||
| Sdccag8 | RHP | Retrohippocampal region | 23.74 | |
| 18.98 | | |||
| Sdccag8 | sAMY | Striatum-like amygdalar nuclei | 11.79 | |
| 8.26 | | |||
| Sdccag8 | STR | Striatum | 9.67 | |
| 6.92 | | |||
| Sdccag8 | STRd | Striatum dorsal region | 5.09 | |
| 3.38 | | |||
| Sdccag8 | STRv | Striatum ventral region | 26.15 | |
| 18.19 | | |||
| Sdccag8 | TH | Thalamus | 15.69 | |
| 12.3 | |