Annotation Detail for STARD10
Basic Information Top
| Gene Symbol: | STARD10 ( MGC14401,NY-CO-28,PCTP2,SDCCAG28 ) |
|---|---|
| Gene Full Name: | StAR-related lipid transfer (START) domain containing 10 |
| Band: | 11q13 |
| Quick Links | Entrez ID:10809; OMIM: NA; Uniprot ID:PCTL_HUMAN; ENSEMBL ID: ENSG00000214530; HGNC ID: 10666 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.188606
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 117 / 564012 | 207 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 201 / 1939121 | 103 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 8 / 94178 | 84 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 32 / 114246 | 280 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 19 / 119369 | 159 | |
| germ cell tumor | 12 / 263845 | 45 | |
| glioma | 12 / 106883 | 112 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 393 / 3360307 | 116 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 8 / 40015 | 199 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 78 / 1100989 | 70 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 12 / 211054 | 56 | |
| heart | 3 / 89626 | 33 | |
| intestine | 56 / 234472 | 238 | |
| kidney | 20 / 211777 | 94 | |
| larynx | 1 / 24145 | 41 | |
| liver | 5 / 207743 | 24 | |
| lung | 20 / 336974 | 59 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 28 / 214812 | 130 | |
| parathyroid | 8 / 20539 | 389 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 52 / 280825 | 185 | |
| prostate | 15 / 189345 | 79 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 12 / 210574 | 56 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 13 / 96619 | 134 | |
| testis | 79 / 330442 | 239 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 7 / 232878 | 30 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_5286_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.45 ± 0.69 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.62 ± 0.24 | |
| Basal Part of Pons | 6 ± 0.32 | |
| Cerebellar Cortex | 5.83 ± 0.41 | |
| Cerebellar Nuclei | 5.45 ± 0.37 | |
| Claustrum | 5.17 ± 0.74 | |
| Epithalamus | 5.37 ± 0.48 | |
| Frontal Lobe | 5.48 ± 0.47 | |
| Globus Pallidus | 5.01 ± 0.39 | |
| Hypothalamus | 5.73 ± 0.44 | |
| Insula | 5.23 ± 0.36 | |
| Limbic Lobe | 5.08 ± 0.56 | |
| Mesencephalon | 5.37 ± 0.44 | |
| Myelencephalon | 5.42 ± 0.55 | |
| Occipital Lobe | 5.55 ± 0.47 | |
| Parietal Lobe | 5.52 ± 0.48 | |
| Pontine Tegmentum | 5.45 ± 0.38 | |
| Striatum | 5.23 ± 0.49 | |
| Subthalamus | 5.35 ± 0.1 | |
| Temporal Lobe | 5.53 ± 0.42 | |
| Thalamus | 5.52 ± 0.39 | |
| White Matter | 4.38 ± 0.62 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Stard10 | CB | Cerebellum | 4.44 | |
| 5.66 | | |||
| Stard10 | CTX | Cerebral cortex | 3.57 | |
| 2.92 | | |||
| Stard10 | HIP | Hippocampal region | 3.56 | |
| 3.75 | | |||
| Stard10 | HPF | Hippocampal formation | 4.33 | |
| 4.1 | | |||
| Stard10 | HY | Hypothalamus | 0.59 | |
| 0.62 | | |||
| Stard10 | LSX | Lateral septal complex | 0.4 | |
| 0.26 | | |||
| Stard10 | MB | Midbrain | 2.93 | |
| 3.36 | | |||
| Stard10 | MY | Medulla | 7.2 | |
| 9.43 | | |||
| Stard10 | OLF | Olfactory bulb | 5.96 | |
| 5.58 | | |||
| Stard10 | P | Pons | 4.79 | |
| 6.18 | | |||
| Stard10 | PAL | Pallidum | 0.59 | |
| 0.49 | | |||
| Stard10 | RHP | Retrohippocampal region | 6.44 | |
| 5.23 | | |||
| Stard10 | sAMY | Striatum-like amygdalar nuclei | 1.11 | |
| 0.83 | | |||
| Stard10 | STR | Striatum | 2.04 | |
| 1.68 | | |||
| Stard10 | STRd | Striatum dorsal region | 2.46 | |
| 2.16 | | |||
| Stard10 | STRv | Striatum ventral region | 1.67 | |
| 1.11 | | |||
| Stard10 | TH | Thalamus | 6.97 | |
| 6.19 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00005521 | 21 | 72 | 92 | MECCDVPAETLYDVLHDIEYR | Peptide Atlas |
| PCTL_HUMAN_1 | 14 | 1 | 14 | MEKLAASTEPQGPR | PRIDE |