AutismKB 2.0

Annotation Detail for CEACAM7


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Basic Information Top
Gene Symbol:CEACAM7 ( CEA,CGM2 )
Gene Full Name: carcinoembryonic antigen-related cell adhesion molecule 7
Band: 19q13.2
Quick LinksEntrez ID:1087; OMIM: NA; Uniprot ID:CEAM7_HUMAN; ENSEMBL ID: ENSG00000007306; HGNC ID: 1819
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus1 / 5640121
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult31 / 193912115
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor8 / 11424670
esophageal tumor2 / 17290115
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal79 / 336030723
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus2 / 2020998
eye0 / 2110540 
heart0 / 896260 
intestine88 / 234472375
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth1 / 6705214
muscle5 / 10771546
nerve0 / 157680 
ovary0 / 1020510 
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx3 / 4132872
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 211848_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.6
Adipocyte6.55
AdrenalCortex7.7
Adrenalgland5.75
Amygdala6.6
Appendix7.75
AtrioventricularNode7.2
BDCA4+_DentriticCells6.65
Bonemarrow8.7
BronchialEpithelialCells6.4
CD105+_Endothelial6.5
CD14+_Monocytes6.95
CD19+_BCells(neg._sel.)6.65
CD33+_Myeloid7.9
CD34+7.65
CD4+_Tcells6.55
CD56+_NKCells7.45
CD71+_EarlyErythroid6.3
CD8+_Tcells5.85
CardiacMyocytes10.35
Caudatenucleus5.9
Cerebellum5.7
CerebellumPeduncles8.05
CiliaryGanglion5.05
CingulateCortex6.9
Colorectaladenocarcinoma6.7
DorsalRootGanglion5.4
FetalThyroid6.55
Fetalbrain6.35
Fetalliver6.15
Fetallung5.2
GlobusPallidus5.05
Heart10.5
Hypothalamus7
Kidney8.1
Leukemia_chronicMyelogenousK-5626
Leukemia_promyelocytic-HL-605.85
Leukemialymphoblastic(MOLT-4)5.2
Liver11.15
Lung7.45
Lymphnode5.7
Lymphoma_burkitts(Daudi)8.6
Lymphoma_burkitts(Raji)10.6
MedullaOblongata7.05
OccipitalLobe6.15
OlfactoryBulb5.25
Ovary5
Pancreas5.6
PancreaticIslet7.8
ParietalLobe7.9
Pituitary8
Placenta6.35
Pons6.5
PrefrontalCortex8.05
Prostate7.6
Salivarygland6.55
SkeletalMuscle13.85
Skin6.45
SmoothMuscle7.6
Spinalcord7.05
SubthalamicNucleus6.25
SuperiorCervicalGanglion10.1
TemporalLobe6.2
Testis5.8
TestisGermCell5.45
TestisIntersitial5.7
TestisLeydigCell7
TestisSeminiferousTubule5.6
Thalamus6.9
Thymus5.05
Thyroid8.3
Tongue7.5
Tonsil9.65
Trachea7.6
TrigeminalGanglion7.5
Uterus5.25
UterusCorpus7.05
WholeBlood7.85
Wholebrain5.3
colon778.2
pineal_day7.98
pineal_night7.78
retina7.95
small_intestine6.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P228302
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.25 ± 0.84
Basal Forebrain2.98 ± 0.44
Basal Part of Pons2.86 ± 0.33
Cerebellar Cortex3.34 ± 0.45
Cerebellar Nuclei2.98 ± 0.55
Claustrum3.64 ± 0.65
Epithalamus2.72 ± 0.55
Frontal Lobe3.01 ± 0.7
Globus Pallidus3.07 ± 0.88
Hypothalamus2.83 ± 0.38
Insula2.9 ± 0.59
Limbic Lobe3.34 ± 0.65
Mesencephalon3.19 ± 0.72
Myelencephalon3.13 ± 0.69
Occipital Lobe3.37 ± 0.63
Parietal Lobe3.19 ± 0.74
Pontine Tegmentum3.08 ± 0.7
Striatum2.79 ± 0.76
Subthalamus2.97 ± 0.71
Temporal Lobe3.09 ± 0.64
Thalamus3.04 ± 0.59
White Matter2.6 ± 0.53
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00803999 18 209 226 NDIGPYECEIQNPVGASR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018