AutismKB 2.0

Annotation Detail for MRPS30


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Basic Information Top
Gene Symbol:MRPS30 ( DKFZp566B2024,MRP-S30,PAP,PDCD9,S30mt )
Gene Full Name: mitochondrial ribosomal protein S30
Band: 5p12
Quick LinksEntrez ID:10884; OMIM: 611991; Uniprot ID:RT30_HUMAN; ENSEMBL ID: ENSG00000112996; HGNC ID: 8769
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst2 / 6231932
fetus9 / 56401215
neonate2 / 3109764
infant1 / 2362042
juvenile6 / 55556107
adult68 / 193912135
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor7 / 9417874
cervical tumor4 / 34366116
chondrosarcoma3 / 8282336
colorectal tumor7 / 11424661
esophageal tumor0 / 172900 
gastrointestinal tumor7 / 11936958
germ cell tumor4 / 26384515
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor3 / 6895943
leukemia5 / 9584252
liver tumor8 / 9635983
lung tumor2 / 10312719
lymphoma9 / 71755125
non-neoplasia1 / 9725010
normal92 / 336030727
ovarian tumor3 / 7668239
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer3 / 10268029
retinoblastoma4 / 4635686
skin tumor2 / 12494916
soft tissue/muscle tissue tumor11 / 12519187
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites1 / 4001524
bladder2 / 2975767
blood5 / 12347840
bone3 / 7165541
bone marrow1 / 4880120
brain24 / 110098921
cervix8 / 48171166
connective tissue8 / 14925553
ear2 / 16212123
embryonic tissue10 / 21572246
esophagus0 / 202090 
eye9 / 21105442
heart3 / 8962633
intestine12 / 23447251
kidney10 / 21177747
larynx0 / 241450 
liver10 / 20774348
lung4 / 33697411
lymph1 / 4427022
lymph node11 / 91610120
mammary gland9 / 15327158
mouth0 / 670520 
muscle7 / 10771564
nerve0 / 157680 
ovary3 / 10205129
pancreas11 / 21481251
parathyroid1 / 2053948
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta7 / 28082524
prostate3 / 18934515
salivary gland0 / 201550 
skin4 / 21057418
spleen2 / 5395237
stomach3 / 9661931
testis9 / 33044227
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea4 / 5241376
umbilical cord2 / 13680146
uterus10 / 23287842
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 218398_at
Cell line Expression level Expression bar
721_B_lymphoblasts103.85
Adipocyte5.5
AdrenalCortex5.55
Adrenalgland4.65
Amygdala8.2
Appendix5.5
AtrioventricularNode4.05
BDCA4+_DentriticCells45
Bonemarrow5.3
BronchialEpithelialCells22.55
CD105+_Endothelial39.95
CD14+_Monocytes10.5
CD19+_BCells(neg._sel.)73
CD33+_Myeloid10.95
CD34+50.6
CD4+_Tcells26.85
CD56+_NKCells75.15
CD71+_EarlyErythroid5.1
CD8+_Tcells34.2
CardiacMyocytes6.85
Caudatenucleus4.65
Cerebellum4.3
CerebellumPeduncles5.95
CiliaryGanglion3.85
CingulateCortex5.55
Colorectaladenocarcinoma7
DorsalRootGanglion4.25
FetalThyroid5.2
Fetalbrain5.1
Fetalliver4.75
Fetallung4.55
GlobusPallidus4.2
Heart7.1
Hypothalamus5.7
Kidney4.35
Leukemia_chronicMyelogenousK-56230.7
Leukemia_promyelocytic-HL-6057.7
Leukemialymphoblastic(MOLT-4)6.85
Liver7.1
Lung6.15
Lymphnode4.7
Lymphoma_burkitts(Daudi)23.45
Lymphoma_burkitts(Raji)57.4
MedullaOblongata4.95
OccipitalLobe4.8
OlfactoryBulb4
Ovary3.5
Pancreas4.7
PancreaticIslet5.9
ParietalLobe5.7
Pituitary5.9
Placenta5.8
Pons5.2
PrefrontalCortex6.65
Prostate6.55
Salivarygland4.35
SkeletalMuscle6.2
Skin4.15
SmoothMuscle6.4
Spinalcord5.35
SubthalamicNucleus4.9
SuperiorCervicalGanglion6.8
TemporalLobe5
Testis11.1
TestisGermCell4.75
TestisIntersitial4.6
TestisLeydigCell8.25
TestisSeminiferousTubule4.75
Thalamus5.3
Thymus4.5
Thyroid7.3
Tongue5.7
Tonsil5.35
Trachea4.65
TrigeminalGanglion5.3
Uterus4.45
UterusCorpus4.7
WholeBlood6.2
Wholebrain11.25
colon12.05
pineal_day6.92
pineal_night7
retina6.525
small_intestine12.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5068_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.18 ± 0.31
Basal Forebrain7.03 ± 0.22
Basal Part of Pons7.18 ± 0.25
Cerebellar Cortex7.14 ± 0.2
Cerebellar Nuclei6.97 ± 0.28
Claustrum6.88 ± 0.47
Epithalamus7 ± 0.21
Frontal Lobe7.12 ± 0.31
Globus Pallidus6.24 ± 0.2
Hypothalamus7.02 ± 0.23
Insula7.11 ± 0.19
Limbic Lobe7.1 ± 0.42
Mesencephalon6.93 ± 0.37
Myelencephalon7.01 ± 0.37
Occipital Lobe7.26 ± 0.27
Parietal Lobe7.24 ± 0.4
Pontine Tegmentum7.05 ± 0.33
Striatum6.94 ± 0.31
Subthalamus6.93 ± 0.54
Temporal Lobe7.07 ± 0.33
Thalamus6.95 ± 0.27
White Matter6.56 ± 0.13
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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