AutismKB 2.0

Annotation Detail for RALBP1


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Basic Information Top
Gene Symbol:RALBP1 ( RIP1,RLIP1,RLIP76 )
Gene Full Name: ralA binding protein 1
Band: 18p11.22
Quick LinksEntrez ID:10928; OMIM: 605801; Uniprot ID:RBP1_HUMAN; ENSEMBL ID: ENSG00000017797; HGNC ID: 9841
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus17 / 56401230
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult73 / 193912137
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor6 / 9417863
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor5 / 26384518
glioma1 / 1068839
head and neck tumor14 / 136302102
kidney tumor1 / 6895914
leukemia2 / 9584220
liver tumor7 / 9635972
lung tumor3 / 10312729
lymphoma1 / 7175513
non-neoplasia0 / 972500 
normal72 / 336030721
ovarian tumor1 / 7668213
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer3 / 10268029
retinoblastoma1 / 4635621
skin tumor2 / 12494916
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites3 / 4001574
bladder0 / 297570 
blood2 / 12347816
bone1 / 7165513
bone marrow1 / 4880120
brain3 / 11009892
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye7 / 21105433
heart3 / 8962633
intestine6 / 23447225
kidney4 / 21177718
larynx0 / 241450 
liver10 / 20774348
lung7 / 33697420
lymph0 / 442700 
lymph node5 / 9161054
mammary gland7 / 15327145
mouth14 / 67052208
muscle2 / 10771518
nerve0 / 157680 
ovary1 / 1020519
pancreas6 / 21481227
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta11 / 28082539
prostate4 / 18934521
salivary gland0 / 201550 
skin6 / 21057428
spleen0 / 539520 
stomach2 / 9661920
testis3 / 3304429
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus8 / 23287834
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202844_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts92.75
Adipocyte53.4
AdrenalCortex56.85
Adrenalgland30.8
Amygdala78.25
Appendix36.65
AtrioventricularNode41.75
BDCA4+_DentriticCells113.55
Bonemarrow31.25
BronchialEpithelialCells77.85
CD105+_Endothelial454.75
CD14+_Monocytes119.75
CD19+_BCells(neg._sel.)136.15
CD33+_Myeloid261.6
CD34+195.4
CD4+_Tcells60.8
CD56+_NKCells211
CD71+_EarlyErythroid196.7
CD8+_Tcells96.1
CardiacMyocytes53.05
Caudatenucleus24.65
Cerebellum26.2
CerebellumPeduncles50.1
CiliaryGanglion36.05
CingulateCortex82.45
Colorectaladenocarcinoma47.9
DorsalRootGanglion30.45
FetalThyroid39.35
Fetalbrain31.95
Fetalliver34.25
Fetallung23.65
GlobusPallidus30.1
Heart32.05
Hypothalamus41
Kidney29.85
Leukemia_chronicMyelogenousK-56226
Leukemia_promyelocytic-HL-6059.95
Leukemialymphoblastic(MOLT-4)34.55
Liver51.55
Lung60.35
Lymphnode25.2
Lymphoma_burkitts(Daudi)40
Lymphoma_burkitts(Raji)36.7
MedullaOblongata49.3
OccipitalLobe43.2
OlfactoryBulb136.25
Ovary23.4
Pancreas31.7
PancreaticIslet44.45
ParietalLobe53.35
Pituitary27.05
Placenta77
Pons35.4
PrefrontalCortex70.15
Prostate204
Salivarygland18.8
SkeletalMuscle58.35
Skin49.75
SmoothMuscle56.7
Spinalcord33.3
SubthalamicNucleus55.15
SuperiorCervicalGanglion54.65
TemporalLobe49.4
Testis30.75
TestisGermCell27.6
TestisIntersitial26.3
TestisLeydigCell34
TestisSeminiferousTubule35
Thalamus26.45
Thymus49.95
Thyroid63.05
Tongue83.9
Tonsil37.9
Trachea24.1
TrigeminalGanglion44.85
Uterus52.65
UterusCorpus40.45
WholeBlood52.7
Wholebrain67.95
colon144.45
pineal_day45.1
pineal_night45.74
retina50.15
small_intestine51.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P230457
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.43 ± 0.24
Basal Forebrain10.58 ± 0.22
Basal Part of Pons10.52 ± 0.17
Cerebellar Cortex10.67 ± 0.12
Cerebellar Nuclei10.62 ± 0.18
Claustrum10.95 ± 0.17
Epithalamus10.97 ± 0.24
Frontal Lobe10.72 ± 0.22
Globus Pallidus10.8 ± 0.27
Hypothalamus10.67 ± 0.13
Insula10.73 ± 0.12
Limbic Lobe10.6 ± 0.25
Mesencephalon10.63 ± 0.21
Myelencephalon10.62 ± 0.24
Occipital Lobe10.45 ± 0.3
Parietal Lobe10.73 ± 0.19
Pontine Tegmentum10.66 ± 0.25
Striatum10.29 ± 0.28
Subthalamus10.76 ± 0.18
Temporal Lobe10.68 ± 0.17
Thalamus10.63 ± 0.22
White Matter10.83 ± 0.07
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ralbp1CBCerebellum3.74
3.89
Ralbp1CTXCerebral cortex20.63
10.21
Ralbp1HIPHippocampal region6.75
4.8
Ralbp1HPFHippocampal formation8.04
4.79
Ralbp1HYHypothalamus2.7
1.37
Ralbp1LSXLateral septal complex0.74
0.68
Ralbp1MBMidbrain3.57
2.58
Ralbp1MYMedulla10.16
6.22
Ralbp1OLFOlfactory bulb9.25
6.19
Ralbp1PPons5.52
3.07
Ralbp1PALPallidum4.15
2.11
Ralbp1RHPRetrohippocampal region11.23
5.1
Ralbp1sAMYStriatum-like amygdalar nuclei4.03
1.43
Ralbp1STRStriatum4.22
2.02
Ralbp1STRdStriatum dorsal region4.66
2.25
Ralbp1STRvStriatum ventral region4.94
2.33
Ralbp1THThalamus2.42
1.33
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00133474 31 170 200 KKPIQEPEVPQIDVPNLKPIFGIPLADAVER Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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