AutismKB 2.0

Annotation Detail for STARD3


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Basic Information Top
Gene Symbol:STARD3 ( CAB1,FLJ41370,MLN64,es64 )
Gene Full Name: StAR-related lipid transfer (START) domain containing 3
Band: 17q11-q12
Quick LinksEntrez ID:10948; OMIM: 607048; Uniprot ID:STAR3_HUMAN; ENSEMBL ID: ENSG00000131748; HGNC ID: 17579
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
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  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202991_at
Cell line Expression level Expression bar
721_B_lymphoblasts14.35
Adipocyte7.5
AdrenalCortex9.15
Adrenalgland7.5
Amygdala8.1
Appendix7.25
AtrioventricularNode6.05
BDCA4+_DentriticCells26.35
Bonemarrow8.05
BronchialEpithelialCells7
CD105+_Endothelial7.75
CD14+_Monocytes23.9
CD19+_BCells(neg._sel.)21.55
CD33+_Myeloid28.15
CD34+21.35
CD4+_Tcells33.2
CD56+_NKCells30.8
CD71+_EarlyErythroid7.2
CD8+_Tcells27.9
CardiacMyocytes9.4
Caudatenucleus6.75
Cerebellum6.15
CerebellumPeduncles8.85
CiliaryGanglion5.5
CingulateCortex9.05
Colorectaladenocarcinoma13.35
DorsalRootGanglion5.7
FetalThyroid7.35
Fetalbrain7.55
Fetalliver6.15
Fetallung6.45
GlobusPallidus6
Heart9.5
Hypothalamus8.4
Kidney6
Leukemia_chronicMyelogenousK-5626.9
Leukemia_promyelocytic-HL-606.1
Leukemialymphoblastic(MOLT-4)7.85
Liver10.05
Lung35.25
Lymphnode6.6
Lymphoma_burkitts(Daudi)9.8
Lymphoma_burkitts(Raji)10.6
MedullaOblongata6.8
OccipitalLobe6.6
OlfactoryBulb8.75
Ovary5.5
Pancreas6
PancreaticIslet7.85
ParietalLobe7.9
Pituitary8.35
Placenta8.4
Pons7.2
PrefrontalCortex12.35
Prostate12.05
Salivarygland5.95
SkeletalMuscle8.35
Skin5.65
SmoothMuscle8.6
Spinalcord8.55
SubthalamicNucleus6.9
SuperiorCervicalGanglion8.35
TemporalLobe6.9
Testis6.9
TestisGermCell7.15
TestisIntersitial7
TestisLeydigCell7.55
TestisSeminiferousTubule7.35
Thalamus7.75
Thymus5.65
Thyroid12.3
Tongue7.15
Tonsil7.4
Trachea5.95
TrigeminalGanglion7.75
Uterus5.9
UterusCorpus6.6
WholeBlood15.35
Wholebrain9.35
colon6.7
pineal_day21.94
pineal_night12.08
retina9.2
small_intestine6.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P224538
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.27 ± 0.81
Basal Forebrain2.51 ± 0.32
Basal Part of Pons2.57 ± 0.53
Cerebellar Cortex2.94 ± 0.73
Cerebellar Nuclei2.82 ± 0.59
Claustrum3.4 ± 1.01
Epithalamus2.54 ± 0.56
Frontal Lobe2.95 ± 0.7
Globus Pallidus3.37 ± 0.7
Hypothalamus2.7 ± 0.74
Insula2.7 ± 0.63
Limbic Lobe2.98 ± 0.62
Mesencephalon2.93 ± 0.76
Myelencephalon2.89 ± 0.7
Occipital Lobe2.44 ± 0.72
Parietal Lobe2.86 ± 0.72
Pontine Tegmentum2.94 ± 0.65
Striatum2.56 ± 0.72
Subthalamus2.62 ± 0.5
Temporal Lobe3 ± 0.64
Thalamus2.7 ± 0.63
White Matter3.54 ± 0.45
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Stard3CBCerebellum9.75
12.42
Stard3CTXCerebral cortex52.32
37.84
Stard3HIPHippocampal region19.85
20.94
Stard3HPFHippocampal formation17.53
16.26
Stard3HYHypothalamus0.24
0.26
Stard3LSXLateral septal complex5.85
4.43
Stard3MBMidbrain0.91
1.13
Stard3MYMedulla2.76
3.69
Stard3OLFOlfactory bulb23.97
17.98
Stard3PPons1.53
2.48
Stard3PALPallidum1.05
0.84
Stard3RHPRetrohippocampal region14.45
10.43
Stard3sAMYStriatum-like amygdalar nuclei4.63
3.37
Stard3STRStriatum7.56
5.15
Stard3STRdStriatum dorsal region8.55
5.91
Stard3STRvStriatum ventral region5.94
3.53
Stard3THThalamus2.39
2.06
Peptide Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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